RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 FAM149AA5PLN7 773 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 KLHL2O95198 593 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 BPGMP07738 259 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 QARSP47897 775 aaKnown RBP16.63■□□□□ 0.25
MCF2L-229ENST00000488765 CLK2P49760 499 aaKnown RBP16.63■□□□□ 0.25
MCF2L-229ENST00000488765 CEACAM7Q14002 265 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 BCL2A1Q16548 175 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 SLC9B1Q4ZJI4 515 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 PPM1JQ5JR12 505 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 NPNTQ6UXI9 565 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 SLFN12Q8IYM2 578 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 PCDH20Q8N6Y1 951 aaKnown RBP16.63■□□□□ 0.25
MCF2L-229ENST00000488765 SLC4A11Q8NBS3 891 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.63■□□□□ 0.25
MCF2L-229ENST00000488765 KBTBD7Q8WVZ9 684 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 RCN3Q96D15 328 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 MASTLQ96GX5 879 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 KCNK16Q96T55 309 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 NAP1L4Q99733 375 aaKnown RBP16.63■□□□□ 0.25
MCF2L-229ENST00000488765 SLC4A5Q9BY07 1137 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 CCPG1Q9ULG6 757 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 POLIQ9UNA4 740 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 SNCAIPQ9Y6H5 919 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 MYO1DO94832 1006 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 ESRRBO95718 433 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 HOXA10P31260 410 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-229ENST00000488765 TTC33Q6PID6 262 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-229ENST00000488765 SPOCD1Q6ZMY3 1216 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 PARP8Q8N3A8 854 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 OR52B2Q96RD2 323 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 DHRS4Q9BTZ2 278 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 POLR1BQ9H9Y6 1135 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 CYP26B1Q9NR63 512 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 GIN1Q9NXP7 522 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 ZNHIT2Q9UHR6 403 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 TNRC6CQ9HCJ0 1690 aaKnown RBP16.62■□□□□ 0.25
MCF2L-229ENST00000488765 RFPL1O75677 317 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 KRT37O76014 449 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 SNRPAP09012 282 aaKnown RBP16.62■□□□□ 0.25
MCF2L-229ENST00000488765 CSH1P0DML2 217 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 CSH2P0DML3 217 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 CCR10P46092 362 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 PHKG1Q16816 387 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 NEPROQ6NW34 567 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 DCUN1D2Q6PH85 259 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 C10orf107Q8IVU9 208 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 DSELQ8IZU8 1212 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 RPF2Q9H7B2 306 aaKnown RBP16.62■□□□□ 0.25
MCF2L-229ENST00000488765 ZNF277Q9NRM2 450 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-229ENST00000488765 THAP1Q9NVV9 213 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 H3BNH8 94 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 SLC16A4O15374 487 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 GUCY1B2O75343 617 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 MAP4P27816 1152 aaKnown RBP16.62■□□□□ 0.25
MCF2L-229ENST00000488765 GABRB3P28472 473 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 PGGT1BP53609 377 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 CRADDP78560 199 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 PPP2R2DQ66LE6 453 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 BORAQ6PGQ7 559 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 LAYNQ6UX15 382 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 LYSMD3Q7Z3D4 306 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 PIWIL3Q7Z3Z3 882 aaKnown RBP16.62■□□□□ 0.25
MCF2L-229ENST00000488765 HEATR4Q86WZ0 1026 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 ADGRF2Q8IZF7 708 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 NAT8LQ8N9F0 302 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 EXD1Q8NHP7 514 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 BIRC8Q96P09 236 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 PGLYRP2Q96PD5 576 aa16.62■□□□□ 0.25
MCF2L-229ENST00000488765 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.62■□□□□ 0.25
MCF2L-229ENST00000488765 TUBA8Q9NY65 449 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-229ENST00000488765 COL22A1Q8NFW1 1626 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-229ENST00000488765 NOTOA8MTQ0 251 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 ZBTB5O15062 677 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 S100A1P23297 94 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 DPP6P42658 865 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 ECE1P42892 770 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 MLLT10P55197 1068 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 ZNF543Q08ER8 600 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 INAQ16352 499 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 FAM209AQ5JX71 171 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 TTC39BQ5VTQ0 682 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-229ENST00000488765 BSPRYQ5W0U4 402 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 SLC26A11Q86WA9 606 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 FIBCD1Q8N539 461 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 MAPK15Q8TD08 544 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 NPAS2Q99743 824 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 PLK2Q9NYY3 685 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 SIRPGQ9P1W8 387 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 AP3B1O00203 1094 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 IPO5O00410 1097 aaKnown RBP16.61■□□□□ 0.25
MCF2L-229ENST00000488765 B4GAT1O43505 415 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 ZNF26P17031 533 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-229ENST00000488765 ABCG1P45844 678 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 NEK2P51955 445 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 RALGDSQ12967 914 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 ZNF618Q5T7W0 954 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 TEDDM1Q5T9Z0 273 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 N4BP2L1Q5TBK1 243 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-229ENST00000488765 CYP4A22Q5TCH4 519 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 NIPAL1Q6NVV3 410 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms