RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 GZMAP12544 262 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 SKILP12757 684 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 SDC4P31431 198 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 SLC6A4P31645 630 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 CASP14P31944 242 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 TIE1P35590 1138 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 FLT3P36888 993 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 GSCP56915 257 aaPredicted RBP15.61■□□□□ 0.09
CXCL12-207ENST00000488591 MESP2Q0VG99 397 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 PTP4A2Q12974 167 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 BRMS1LQ5PSV4 323 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 NADSYN1Q6IA69 706 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 RFWD3Q6PCD5 774 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 MON1BQ7L1V2 547 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 SYT13Q7L8C5 426 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 TRMT11Q7Z4G4 463 aaKnown RBP15.61■□□□□ 0.09
CXCL12-207ENST00000488591 CHSY1Q86X52 802 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 MCOLN2Q8IZK6 566 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 HJURPQ8NCD3 748 aaPredicted RBP15.61■□□□□ 0.09
CXCL12-207ENST00000488591 C3orf20Q8ND61 904 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 FAM122AQ96E09 287 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 PGAP3Q96FM1 320 aaPredicted RBP15.61■□□□□ 0.09
CXCL12-207ENST00000488591 SYT11Q9BT88 431 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.61■□□□□ 0.09
CXCL12-207ENST00000488591 SLC27A6Q9Y2P4 619 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 CACNA1IQ9P0X4 2223 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 SIGLEC16A6NMB1 481 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 TMCO5BA8MYB1 307 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 F5H5T6 163 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 GFRA2O00451 464 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 SERPING1P05155 500 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 PDGFRAP16234 1089 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 DESP17661 470 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 TACR2P21452 398 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 HOXD9P28356 352 aaPredicted RBP15.6■□□□□ 0.09
CXCL12-207ENST00000488591 CXCR3P49682 368 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 TSR1Q2NL82 804 aaKnown RBP15.6■□□□□ 0.09
CXCL12-207ENST00000488591 MS4A13Q5J8X5 152 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 ACBD5Q5T8D3 534 aaPredicted RBP15.6■□□□□ 0.09
CXCL12-207ENST00000488591 E4F1Q66K89 784 aaPredicted RBP15.6■□□□□ 0.09
CXCL12-207ENST00000488591 RAP1GAP2Q684P5 730 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 SDE2Q6IQ49 451 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 DNAJC24Q6P3W2 148 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 PKN3Q6P5Z2 889 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 TSSK4Q6SA08 328 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 ANKS1BQ7Z6G8 1248 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 LGI2Q8N0V4 545 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 EMC1Q8N766 993 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 ZNF513Q8N8E2 541 aaPredicted RBP15.6■□□□□ 0.09
CXCL12-207ENST00000488591 UCMAQ8WVF2 138 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 RXFP2Q8WXD0 754 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 ATRIPQ8WXE1 791 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 CFAP57Q96MR6 1250 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 TBCBQ99426 244 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 TRIM5Q9C035 493 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 PIGVQ9NUD9 493 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 ZNHIT6Q9NWK9 470 aaKnown RBP15.6■□□□□ 0.09
CXCL12-207ENST00000488591 ZSCAN32Q9NX65 697 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 STIM2Q9P246 746 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 STARD13Q9Y3M8 1113 aa15.6■□□□□ 0.09
CXCL12-207ENST00000488591 ATG2BQ96BY7 2078 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 TIMM44O43615 452 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 RTN2O75298 545 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 KLF8O95600 359 aaPredicted RBP15.59■□□□□ 0.09
CXCL12-207ENST00000488591 FTLP02792 175 aaPredicted RBP15.59■□□□□ 0.09
CXCL12-207ENST00000488591 HOXA6P31267 233 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 RDXP35241 583 aaKnown RBP15.59■□□□□ 0.09
CXCL12-207ENST00000488591 KIR2DL1P43626 348 aaPredicted RBP15.59■□□□□ 0.09
CXCL12-207ENST00000488591 DMC1Q14565 340 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 EOGTQ5NDL2 527 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 RABGAP1LQ5R372 815 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 SARM1Q6SZW1 724 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 VSTM4Q8IW00 320 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 SFTPA1Q8IWL2 248 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 CCDC33Q8N5R6 958 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 CAMKK1Q8N5S9 505 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 ALLCQ8N6M5 410 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 TRIM11Q96F44 468 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 P2RY11Q96G91 374 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 TKTL2Q9H0I9 626 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 FAM86C1Q9NVL1 165 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 ARHGEF38Q9NXL2 777 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 TAS2R14Q9NYV8 317 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 XPO7Q9UIA9 1087 aaKnown RBP15.59■□□□□ 0.09
CXCL12-207ENST00000488591 MMP17Q9ULZ9 603 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 PCDHGA2Q9Y5H1 932 aa15.59■□□□□ 0.09
CXCL12-207ENST00000488591 C2CD4BA6NLJ0 364 aa15.58■□□□□ 0.08
CXCL12-207ENST00000488591 PRRT4C9JH25 899 aa15.58■□□□□ 0.08
CXCL12-207ENST00000488591 DDX3XO00571 662 aaKnown RBP eCLIP15.58■□□□□ 0.08
CXCL12-207ENST00000488591 TFE3P19532 575 aaPredicted RBP15.58■□□□□ 0.08
CXCL12-207ENST00000488591 GPD1P21695 349 aa15.58■□□□□ 0.08
CXCL12-207ENST00000488591 RFC1P35251 1148 aaPredicted RBP15.58■□□□□ 0.08
CXCL12-207ENST00000488591 PTPN9P43378 593 aa15.58■□□□□ 0.08
CXCL12-207ENST00000488591 SGSHP51688 502 aa15.58■□□□□ 0.08
CXCL12-207ENST00000488591 RPS24P62847 133 aaKnown RBP15.58■□□□□ 0.08
CXCL12-207ENST00000488591 ATP11AP98196 1134 aa15.58■□□□□ 0.08
CXCL12-207ENST00000488591 EIF4HQ15056 248 aaKnown RBP15.58■□□□□ 0.08
CXCL12-207ENST00000488591 ARL13BQ3SXY8 428 aa15.58■□□□□ 0.08
CXCL12-207ENST00000488591 EMC10Q5UCC4 262 aa15.58■□□□□ 0.08
CXCL12-207ENST00000488591 TTC39BQ5VTQ0 682 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms