RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 IRX2Q9BZI1 471 aaPredicted RBP12.83□□□□□ -0.36
TTC3-221ENST00000488522 TMEM8AQ9HCN3 771 aa12.83□□□□□ -0.36
TTC3-221ENST00000488522 MARCH2Q9P0N8 246 aa12.83□□□□□ -0.36
TTC3-221ENST00000488522 EIF2B4Q9UI10 523 aaKnown RBP12.83□□□□□ -0.36
TTC3-221ENST00000488522 STRIP2Q9ULQ0 834 aa12.83□□□□□ -0.36
TTC3-221ENST00000488522 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.83□□□□□ -0.36
TTC3-221ENST00000488522 KNTC1P50748 2209 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 SETXQ7Z333 2677 aaKnown RBP12.82□□□□□ -0.36
TTC3-221ENST00000488522 C10orf142B7Z368 130 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 CALUO43852 315 aaPredicted RBP12.82□□□□□ -0.36
TTC3-221ENST00000488522 PCDHGA12O60330 932 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 RHOBTB3O94955 611 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 EPHX1P07099 455 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 ACADMP11310 421 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 GTF2H1P32780 548 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 GRIA4P48058 902 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 GCLMP48507 274 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 CAMK2BQ13554 666 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 NFKBIBQ15653 356 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 PTPRNQ16849 979 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 COL28A1Q2UY09 1125 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 CEP135Q66GS9 1140 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 SERPINA13PQ6UXR4 307 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 DENND1CQ8IV53 801 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 GALNT15Q8N3T1 639 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 SETD7Q8WTS6 366 aaKnown RBP12.82□□□□□ -0.36
TTC3-221ENST00000488522 MIR1-1HGQ9H1L0 117 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 LHX5Q9H2C1 402 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 OLA1Q9NTK5 396 aaKnown RBP12.82□□□□□ -0.36
TTC3-221ENST00000488522 SLCO1B1Q9Y6L6 691 aa12.82□□□□□ -0.36
TTC3-221ENST00000488522 KALRNO60229 2985 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 A0A087WV48 116 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 A0A1B0GVT2 93 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 E9PAM4 449 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 KIF20AO95235 890 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 ATXN1LP0C7T5 689 aaKnown RBP12.81□□□□□ -0.36
TTC3-221ENST00000488522 TRIM49P0CI25 452 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 TRIM49CP0CI26 452 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 CD58P19256 250 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 NR2F2P24468 414 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 HLA-FP30511 346 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 YWHAGP61981 247 aaKnown RBP eCLIP12.81□□□□□ -0.36
TTC3-221ENST00000488522 SUZ12Q15022 739 aaKnown RBP12.81□□□□□ -0.36
TTC3-221ENST00000488522 SMAD1Q15797 465 aaKnown RBP12.81□□□□□ -0.36
TTC3-221ENST00000488522 KIF19Q2TAC6 998 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 KLHL40Q2TBA0 621 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 ZCWPW2Q504Y3 356 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 MPPE1Q53F39 396 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 CCDC183Q5T5S1 534 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 PIGZQ86VD9 579 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 SCUBE3Q8IX30 993 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 SCML4Q8N228 414 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 ANKRD52Q8NB46 1076 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 SLC4A11Q8NBS3 891 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 SPATA20Q8TB22 786 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 MDM1Q8TC05 714 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 SORCS1Q8WY21 1168 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 IGSF8Q969P0 613 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 TMEM176AQ96HP8 235 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 ORAI3Q9BRQ5 295 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 CIPCQ9C0C6 399 aa12.81□□□□□ -0.36
TTC3-221ENST00000488522 HBS1LQ9Y450 684 aaKnown RBP12.81□□□□□ -0.36
TTC3-221ENST00000488522 TP53BP1Q12888 1972 aaPredicted RBP12.81□□□□□ -0.36
TTC3-221ENST00000488522 SLC12A8A0AV02 714 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 TNFSF14O43557 240 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 TSPAN3O60637 253 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 ZBED1O96006 694 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 ACSL1P33121 698 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 GRK6P43250 576 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 CSNK1EP49674 416 aaKnown RBP12.8□□□□□ -0.36
TTC3-221ENST00000488522 RAD23BP54727 409 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 SKOR2Q2VWA4 1001 aaPredicted RBP12.8□□□□□ -0.36
TTC3-221ENST00000488522 MPP7Q5T2T1 576 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 KRT39Q6A163 491 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 C19orf48Q6RUI8 117 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 ADIPOR2Q86V24 386 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 FAM186BQ8IYM0 893 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 GUF1Q8N442 669 aaKnown RBP12.8□□□□□ -0.36
TTC3-221ENST00000488522 CCDC150Q8NCX0 1101 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 DDI1Q8WTU0 396 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 GTPBP4Q9BZE4 634 aaKnown RBP12.8□□□□□ -0.36
TTC3-221ENST00000488522 C6orf106Q9H6K1 298 aaPredicted RBP12.8□□□□□ -0.36
TTC3-221ENST00000488522 TM9SF3Q9HD45 589 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 CISHQ9NSE2 258 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 KIAA1468Q9P260 1216 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 MAN1B1Q9UKM7 699 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 BTBD3Q9Y2F9 522 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 RAXQ9Y2V3 346 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 SNX11Q9Y5W9 270 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 CFAP46Q8IYW2 2715 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 ASXL3Q9C0F0 2248 aa12.8□□□□□ -0.36
TTC3-221ENST00000488522 FLNBO75369 2602 aaKnown RBP12.79□□□□□ -0.36
TTC3-221ENST00000488522 XPO1O14980 1071 aaKnown RBP12.79□□□□□ -0.36
TTC3-221ENST00000488522 DFNA5O60443 496 aa12.79□□□□□ -0.36
TTC3-221ENST00000488522 HMBSP08397 361 aa12.79□□□□□ -0.36
TTC3-221ENST00000488522 KRT13P13646 458 aa12.79□□□□□ -0.36
TTC3-221ENST00000488522 RPL13P26373 211 aaKnown RBP12.79□□□□□ -0.36
TTC3-221ENST00000488522 CD27P26842 260 aa12.79□□□□□ -0.36
TTC3-221ENST00000488522 PSMC2P35998 433 aaKnown RBP12.79□□□□□ -0.36
TTC3-221ENST00000488522 CTSKP43235 329 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms