RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 PTK6Q13882 451 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 DPYSQ14117 519 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 OASLQ15646 514 aaKnown RBP7.15□□□□□ -1.26
PDAP1-203ENST00000488214 RAB30Q15771 203 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 MAP9Q49MG5 647 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 HECTD3Q5T447 861 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 FAM72AQ5TYM5 149 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 PIK3R6Q5UE93 754 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 FAM72DQ6L9T8 149 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 RWDD4Q6NW29 188 aaKnown RBP7.15□□□□□ -1.26
PDAP1-203ENST00000488214 TMCO3Q6UWJ1 677 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 B4GALNT4Q76KP1 1039 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 DNAJB7Q7Z6W7 309 aaPredicted RBP7.15□□□□□ -1.26
PDAP1-203ENST00000488214 CHSY1Q86X52 802 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 FAM72BQ86X60 149 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 DDX42Q86XP3 938 aaKnown RBP eCLIP7.15□□□□□ -1.26
PDAP1-203ENST00000488214 CDKL3Q8IVW4 592 aaPredicted RBP7.15□□□□□ -1.26
PDAP1-203ENST00000488214 ALLCQ8N6M5 410 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 MRPL43Q8N983 215 aaKnown RBP7.15□□□□□ -1.26
PDAP1-203ENST00000488214 CCDC89Q8N998 374 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 SLC35B2Q8TB61 432 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 SLC22A17Q8WUG5 538 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 RSAD2Q8WXG1 361 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 ARNTL2Q8WYA1 636 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 SLCO2A1Q92959 643 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 NKD2Q969F2 451 aaPredicted RBP7.15□□□□□ -1.26
PDAP1-203ENST00000488214 TBC1D31Q96DN5 1066 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 MYRFLQ96LU7 910 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 QKIQ96PU8 341 aaKnown RBP eCLIP7.15□□□□□ -1.26
PDAP1-203ENST00000488214 TMEM121Q9BTD3 319 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 FRMD8P1Q9BZ68 369 aaPredicted RBP7.15□□□□□ -1.26
PDAP1-203ENST00000488214 C10orf88Q9H8K7 445 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 GDF3Q9NR23 364 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 ETNK2Q9NVF9 386 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 XPO7Q9UIA9 1087 aaKnown RBP7.15□□□□□ -1.26
PDAP1-203ENST00000488214 MSRAQ9UJ68 235 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 DNMT3LQ9UJW3 386 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 RAB21Q9UL25 225 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 NFU1Q9UMS0 254 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 ZNF148Q9UQR1 794 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 IRAK3Q9Y616 596 aa7.15□□□□□ -1.26
PDAP1-203ENST00000488214 NUP205Q92621 2012 aa7.15□□□□□ -1.27
PDAP1-203ENST00000488214 NOTCH4Q99466 2003 aa7.15□□□□□ -1.27
PDAP1-203ENST00000488214 E9PAM4 449 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 H0YGN5 161 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 H3BNC9 293 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 DCLK1O15075 740 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 FGF10O15520 208 aaPredicted RBP7.14□□□□□ -1.27
PDAP1-203ENST00000488214 CLASP2O75122 1294 aaKnown RBP7.14□□□□□ -1.27
PDAP1-203ENST00000488214 CLUHO75153 1309 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 RFPL2O75678 378 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 IGLV3-27P01718 113 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 KRT14P02533 472 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 ITGAVP06756 1048 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 SRGAP2BP0DMP2 458 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 MBL2P11226 248 aaPredicted RBP7.14□□□□□ -1.27
PDAP1-203ENST00000488214 MYL4P12829 197 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 ETS1P14921 441 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 ERCC2P18074 760 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 EPHB2P29323 1055 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 SERPINB6P35237 376 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 ATP5C1P36542 298 aaKnown RBP7.14□□□□□ -1.27
PDAP1-203ENST00000488214 RPL21P46778 160 aaKnown RBP7.14□□□□□ -1.27
PDAP1-203ENST00000488214 CARSP49589 748 aaKnown RBP7.14□□□□□ -1.27
PDAP1-203ENST00000488214 KPNA1P52294 538 aaPredicted RBP7.14□□□□□ -1.27
PDAP1-203ENST00000488214 ZNF135P52742 658 aaPredicted RBP7.14□□□□□ -1.27
PDAP1-203ENST00000488214 GDF10P55107 478 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 LMNB2Q03252 620 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 EIF4EBP2Q13542 120 aaPredicted RBP7.14□□□□□ -1.27
PDAP1-203ENST00000488214 CUL1Q13616 776 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 CAMK1Q14012 370 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 TRADDQ15628 312 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 RAP1GAP2Q684P5 730 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 NUGGCQ68CJ6 796 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 DRICH1Q6PGQ1 229 aaPredicted RBP7.14□□□□□ -1.27
PDAP1-203ENST00000488214 DARS2Q6PI48 645 aaKnown RBP7.14□□□□□ -1.27
PDAP1-203ENST00000488214 LILRA6Q6PI73 481 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 SYDE1Q6ZW31 735 aaPredicted RBP7.14□□□□□ -1.27
PDAP1-203ENST00000488214 PRUNE1Q86TP1 453 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 RBM23Q86U06 439 aaKnown RBP7.14□□□□□ -1.27
PDAP1-203ENST00000488214 TMC8Q8IU68 726 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 HS6ST3Q8IZP7 471 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 NPWQ8N729 165 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 ATP6V0D2Q8N8Y2 350 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 FAM71DQ8N9W8 422 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 NETO2Q8NC67 525 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 TTC16Q8NEE8 873 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 ATL2Q8NHH9 583 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 LRRN4Q8WUT4 740 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 PLD4Q96BZ4 506 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 SLC39A13Q96H72 371 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 GDAP1L1Q96MZ0 367 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 HAPLN3Q96S86 360 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 GDF15Q99988 308 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 CORO1BQ9BR76 489 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 ERP44Q9BS26 406 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 IL21Q9HBE4 155 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 PCDH9Q9HC56 1237 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 ARFGAP3Q9NP61 516 aa7.14□□□□□ -1.27
PDAP1-203ENST00000488214 ASAH2Q9NR71 780 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms