RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 PRKD1Q15139 912 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 SF3B3Q15393 1217 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 TRIP10Q15642 601 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 PHKG1Q16816 387 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 TRIM71Q2Q1W2 868 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 FAM209AQ5JX71 171 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 FAM26FQ5R3K3 315 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 LPCAT4Q643R3 524 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 LVRNQ6Q4G3 990 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 TTC7BQ86TV6 843 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 C11orf74Q86VG3 221 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 HID1Q8IV36 788 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 FAM178BQ8IXR5 827 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 TMEM192Q8IY95 271 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 SLFN12Q8IYM2 578 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 CENPSQ8N2Z9 138 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 ZCCHC9Q8N567 271 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 TTC39CQ8N584 583 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 CCDC89Q8N998 374 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 CATSPER1Q8NEC5 780 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 NGDNQ8NEJ9 315 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 KLHL6Q8WZ60 621 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 DNAJC19Q96DA6 116 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 ARHGEF26Q96DR7 871 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 LBHD1Q9BQE6 289 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 PSD2Q9BQI7 771 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 MXD3Q9BW11 206 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 TSSK1BQ9BXA7 367 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 TDRD1Q9BXT4 1180 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 INO80BQ9C086 356 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 NMUR2Q9GZQ4 415 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 CCDC68Q9H2F9 335 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 ATXN3LQ9H3M9 355 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 DNAJC18Q9H819 358 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 PSTPIP2Q9H939 334 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 ARMT1Q9H993 441 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 VTA1Q9NP79 307 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 VPS45Q9NRW7 570 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 PSMC3IPQ9P2W1 217 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 TBK1Q9UHD2 729 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 AJAP1Q9UKB5 411 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 PCDHA6Q9UN73 950 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 TMA7Q9Y2S6 64 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 DTNAQ9Y4J8 743 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 PCDHA8Q9Y5H6 950 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 PCDHA2Q9Y5H9 948 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 ALG6Q9Y672 507 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 MAD1L1Q9Y6D9 718 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 TNS3Q68CZ2 1445 aa4.92□□□□□ -1.62
CDC42BPA-213ENST00000488131 TRPM3Q9HCF6 1732 aaPredicted RBP4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 KIAA1551Q9HCM1 1747 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 TCRBV7S2A1N4TA0A589 114 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 H0YJX3 145 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 H3BSA7 217 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 K7EPI3 171 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 RGS13O14921 159 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 ALOX15BO15296 676 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 SLC16A3O15427 465 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 PDPK1O15530 556 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 RSL1D1O76021 490 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 CRTAMO95727 393 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 FAM58BPP0C7Q3 252 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 ACTN1P12814 892 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 ATF2P15336 505 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 SLC9A1P19634 815 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 AOC1P19801 751 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 ENDOUP21128 410 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 ADRA1DP25100 572 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 CA8P35219 290 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 SOX5P35711 763 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 STT3AP46977 705 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 GSSP48637 474 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 EIF2B2P49770 351 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 NT5C2P49902 561 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 HSD17B4P51659 736 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 ARL4CP56559 192 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 EFTUD2Q15029 972 aaKnown RBP eCLIP4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 PKN2Q16513 984 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 DCAF6Q58WW2 860 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 PRAMEF13Q5VWM6 474 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 EGFLAMQ63HQ2 1017 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 SLC6A19Q695T7 634 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 CDPF1Q6NVV7 123 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 AADACL2Q6P093 401 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 CLEC4GQ6UXB4 293 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 RNF207Q6ZRF8 634 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 Q6ZS46 218 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 SPATC1Q76KD6 591 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 LPCAT2Q7L5N7 544 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 KBTBD6Q86V97 674 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 DGKHQ86XP1 1220 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 DNAAF5Q86Y56 855 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 RTKN2Q8IZC4 609 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 LCORLQ8N3X6 602 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 BAHD1Q8TBE0 780 aaPredicted RBP4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 PPP4R1Q8TF05 950 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 MZB1Q8WU39 189 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 DCUN1D1Q96GG9 259 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 ZNF496Q96IT1 587 aaPredicted RBP4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 PLEKHA8Q96JA3 519 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms