RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 MYLIPQ8WY64 445 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 SUSD6Q92537 303 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 HSPH1Q92598 858 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 KRT35Q92764 455 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 TCEAL4Q96EI5 215 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 SNRNP25Q9BV90 132 aaKnown RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 FRMD8P1Q9BZ68 369 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 DHX35Q9H5Z1 703 aaKnown RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 CATSPERBQ9H7T0 1116 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 UBE2ZQ9H832 354 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 MTMR10Q9NXD2 777 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 PPARGC1AQ9UBK2 798 aaKnown RBP11.43□□□□□ -0.58
HDLBP-242ENST00000488013 OR12D3Q9UGF7 316 aa11.43□□□□□ -0.58
HDLBP-242ENST00000488013 GOLGA6L10A0A0M3HER8 536 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 F5H5T6 163 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 LEFTY2O00292 366 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 DAPK3O43293 454 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 CEP104O60308 925 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 GJA1P17302 382 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 CEBPBP17676 345 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 KDELR1P24390 212 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 CORO1AP31146 461 aaKnown RBP11.42□□□□□ -0.58
HDLBP-242ENST00000488013 GJC1P36383 396 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 TPI1P60174 286 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 NTHL1P78549 312 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 TAZQ16635 292 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 WHAMMP3Q1A5X7 153 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 SMTNL2Q2TAL5 461 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 PPP6R3Q5H9R7 873 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-242ENST00000488013 KCNT1Q5JUK3 1230 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 MPP7Q5T2T1 576 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 GET4Q7L5D6 327 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-242ENST00000488013 ARID3BQ8IVW6 561 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-242ENST00000488013 CCDC117Q8IWD4 279 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-242ENST00000488013 LZTR1Q8N653 840 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 CCDC185Q8N715 623 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 TTC13Q8NBP0 860 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 ITFG1Q8TB96 612 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 SH3RF2Q8TEC5 729 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 ALG3Q92685 438 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 USP13Q92995 863 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-242ENST00000488013 NXPE3Q969Y0 559 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 ZFRQ96KR1 1074 aaKnown RBP11.42□□□□□ -0.58
HDLBP-242ENST00000488013 ASB16Q96NS5 453 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 GUCD1Q96NT3 240 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 PEBP4Q96S96 227 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 CYP2S1Q96SQ9 504 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 CALN1Q9BXU9 219 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 ADAM33Q9BZ11 813 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 OSBPL8Q9BZF1 889 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 PCDH18Q9HCL0 1135 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 ZFP14Q9HCL3 533 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 SMPD4Q9NXE4 827 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 CALCOCO1Q9P1Z2 691 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 CFAP97Q9P2B7 532 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 CDC23Q9UJX2 597 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 NR2E1Q9Y466 385 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 RAD54BQ9Y620 910 aa11.42□□□□□ -0.58
HDLBP-242ENST00000488013 PGRMC1O00264 195 aaKnown RBP11.41□□□□□ -0.58
HDLBP-242ENST00000488013 EEF2KO00418 725 aaKnown RBP11.41□□□□□ -0.58
HDLBP-242ENST00000488013 URI1O94763 535 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-242ENST00000488013 MOCS2O96007 188 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-242ENST00000488013 CYBBP04839 570 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 HMBSP08397 361 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 PYGMP11217 842 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 LAMP2P13473 410 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 KCNA5P22460 613 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 SERPINB6P35237 376 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 CDKN2BP42772 138 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 NR2C2P49116 596 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 DNA2P51530 1060 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 ARSEP51690 589 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 KCNQ1P51787 676 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 ATXN1P54253 815 aaKnown RBP11.41□□□□□ -0.58
HDLBP-242ENST00000488013 OXCT1P55809 520 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 TUBB4BP68371 445 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 AMPD2Q01433 879 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 DLX2Q07687 328 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-242ENST00000488013 AUHQ13825 339 aaKnown RBP11.41□□□□□ -0.58
HDLBP-242ENST00000488013 AAK1Q2M2I8 961 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 SPOCD1Q6ZMY3 1216 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 Q6ZNB5 142 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 RFX8Q6ZV50 586 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 CYP4V2Q6ZWL3 525 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-242ENST00000488013 DENND1CQ8IV53 801 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 RASGEF1CQ8N431 466 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 CPXM2Q8N436 756 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 DEPDC1BQ8WUY9 529 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 RAPGEF5Q92565 580 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 FAF2Q96CS3 445 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 TBC1D31Q96DN5 1066 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 RPGRIP1Q96KN7 1286 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 SLC22A12Q96S37 553 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 APOL5Q9BWW9 433 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 GKN1Q9NS71 199 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 EPS15L1Q9UBC2 864 aa11.41□□□□□ -0.58
HDLBP-242ENST00000488013 AGO1Q9UL18 857 aaKnown RBP11.41□□□□□ -0.58
HDLBP-242ENST00000488013 PACSIN2Q9UNF0 486 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-242ENST00000488013 USP15Q9Y4E8 981 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms