RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 FAM133BQ5BKY9 247 aaKnown RBP13.79□□□□□ -0.2
COL4A6-207ENST00000487645 MS4A13Q5J8X5 152 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 LY6G5CQ5SRR4 150 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 MPP7Q5T2T1 576 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 PIK3R6Q5UE93 754 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 NADSYN1Q6IA69 706 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 SCYL2Q6P3W7 929 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 SLFN11Q7Z7L1 901 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 TMEM25Q86YD3 366 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 PSTKQ8IV42 348 aaKnown RBP13.79□□□□□ -0.2
COL4A6-207ENST00000487645 MSANTD3Q96H12 275 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 BTBD6Q96KE9 485 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 PRMT1Q99873 361 aaKnown RBP13.79□□□□□ -0.2
COL4A6-207ENST00000487645 TSGA10Q9BZW7 698 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 C8orf33Q9H7E9 229 aaPredicted RBP13.79□□□□□ -0.2
COL4A6-207ENST00000487645 GTSE1Q9NYZ3 720 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 MARK1Q9P0L2 795 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 MUTYHQ9UIF7 546 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 TFR2Q9UP52 801 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 DUSP10Q9Y6W6 482 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 VCANP13611 3396 aa13.79□□□□□ -0.2
COL4A6-207ENST00000487645 GOLGA6L7A0A1B0GV03 622 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 OTOL1A6NHN0 477 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-207ENST00000487645 I6L893 689 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-207ENST00000487645 HOXC11O43248 304 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-207ENST00000487645 PRPSAP2O60256 369 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 CYBBP04839 570 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 CYP17A1P05093 508 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 ALADP13716 330 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 TACR2P21452 398 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 SLC6A4P31645 630 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 SLC1A1P43005 524 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 NRG1Q02297 640 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-207ENST00000487645 IFI16Q16666 785 aaKnown RBP13.78□□□□□ -0.2
COL4A6-207ENST00000487645 HADHQ16836 314 aaKnown RBP13.78□□□□□ -0.2
COL4A6-207ENST00000487645 BOLA3Q53S33 107 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 ERMARDQ5T6L9 678 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 C1orf228Q6PIY5 440 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 RALGPS2Q86X27 583 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-207ENST00000487645 RNF10Q8N5U6 811 aaKnown RBP13.78□□□□□ -0.2
COL4A6-207ENST00000487645 EDAQ92838 391 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 TMA16Q96EY4 203 aaKnown RBP13.78□□□□□ -0.2
COL4A6-207ENST00000487645 ZNF830Q96NB3 372 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-207ENST00000487645 ANLNQ9NQW6 1124 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 XPO7Q9UIA9 1087 aaKnown RBP13.78□□□□□ -0.2
COL4A6-207ENST00000487645 FZD10Q9ULW2 581 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 USP18Q9UMW8 372 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 HS3ST4Q9Y661 456 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 F5P12259 2224 aa13.78□□□□□ -0.2
COL4A6-207ENST00000487645 F5H5T6 163 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 DCXO43602 365 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 KRT86O43790 486 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 PENKP01210 267 aaPredicted RBP13.77□□□□□ -0.21
COL4A6-207ENST00000487645 ADH5P11766 374 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 GJA4P35212 333 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 PRKCQQ04759 706 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 AUHQ13825 339 aaKnown RBP13.77□□□□□ -0.21
COL4A6-207ENST00000487645 C5orf22Q49AR2 442 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 EFHC2Q5JST6 749 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 RAP1GAP2Q684P5 730 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 RFWD3Q6PCD5 774 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 LRRC31Q6UY01 552 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 TPGS1Q6ZTW0 290 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 CCDC185Q8N715 623 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 TPCN2Q8NHX9 752 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 DDI1Q8WTU0 396 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 EXOC4Q96A65 974 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 SHDQ96IW2 340 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 BBS2Q9BXC9 721 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 SLC2A11Q9BYW1 496 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 SIK2Q9H0K1 926 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 KCNF1Q9H3M0 494 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 RETREG1Q9H6L5 497 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 OR12D3Q9UGF7 316 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 PCSK1NQ9UHG2 260 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 SALL4Q9UJQ4 1053 aa13.77□□□□□ -0.21
COL4A6-207ENST00000487645 NUP205Q92621 2012 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 KIAA1549LQ6ZVL6 1849 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 IGLV3-10A0A075B6K4 115 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 DRGXA6NNA5 263 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 MAN2B1O00754 1011 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 BUB1BO60566 1050 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-207ENST00000487645 TSPAN3O60637 253 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 TYRP14679 529 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 L1CAMP32004 1257 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 EIF2DP41214 584 aaKnown RBP13.76□□□□□ -0.21
COL4A6-207ENST00000487645 NAP1L1P55209 391 aaKnown RBP13.76□□□□□ -0.21
COL4A6-207ENST00000487645 MLF2Q15773 248 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-207ENST00000487645 GAB4Q2WGN9 574 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 ANO4Q32M45 955 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 PREPLQ4J6C6 727 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-207ENST00000487645 RABGAP1LQ5R372 815 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 TTC39BQ5VTQ0 682 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-207ENST00000487645 FYB2Q5VWT5 728 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 RNF43Q68DV7 783 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 FBXL22Q6P050 247 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 CYP4V2Q6ZWL3 525 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-207ENST00000487645 CHSY1Q86X52 802 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 ZNF683Q8IZ20 524 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 LGI2Q8N0V4 545 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms