RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 RCCD1A6NED2 376 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 SPECC1L-ADORA2AF8WAN1 911 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 PRPSAP2O60256 369 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 LRCH4O75427 683 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 CCDC175P0C221 793 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 ALADP13716 330 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 TACR2P21452 398 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 GJC1P36383 396 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 NAP1L1P55209 391 aaKnown RBP13.21□□□□□ -0.29
PRDM2-208ENST00000487453 GAD2Q05329 585 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 KIF5AQ12840 1032 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 ACAP1Q15027 740 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 MLF2Q15773 248 aaPredicted RBP13.21□□□□□ -0.29
PRDM2-208ENST00000487453 MPPE1Q53F39 396 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 SLC44A4Q53GD3 710 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 EFHC2Q5JST6 749 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 IER5LQ5T953 404 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 PIK3R6Q5UE93 754 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 RHBDF2Q6PJF5 856 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 SLFN11Q7Z7L1 901 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 FAM217AQ8IXS0 508 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 LGI2Q8N0V4 545 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 NIPA2Q8N8Q9 360 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 AZIN2Q96A70 460 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 PRICKLE1Q96MT3 831 aaPredicted RBP13.21□□□□□ -0.29
PRDM2-208ENST00000487453 NCAPGQ9BPX3 1015 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 COL25A1Q9BXS0 654 aaPredicted RBP13.21□□□□□ -0.29
PRDM2-208ENST00000487453 PLK2Q9NYY3 685 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 WNT16Q9UBV4 365 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 STOML2Q9UJZ1 356 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 VANGL2Q9ULK5 521 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 HS3ST4Q9Y661 456 aa13.21□□□□□ -0.29
PRDM2-208ENST00000487453 A0A0A6YYK5 440 aaPredicted RBP13.2□□□□□ -0.3
PRDM2-208ENST00000487453 I6L893 689 aaPredicted RBP13.2□□□□□ -0.3
PRDM2-208ENST00000487453 TNFRSF10AO00220 468 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 HOXC11O43248 304 aaPredicted RBP13.2□□□□□ -0.3
PRDM2-208ENST00000487453 BUB1O43683 1085 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 MTA2O94776 668 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 PROSCO94903 275 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 TYRP14679 529 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 MIPP30301 263 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 CTHP32929 405 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 GJA4P35212 333 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 ADRA1BP35368 520 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 SGSHP51688 502 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 AMPD2Q01433 879 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 RABGAP1LQ5R372 815 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 CFAP52Q8N1V2 620 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 NAT16Q8N8M0 369 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 HJURPQ8NCD3 748 aaPredicted RBP13.2□□□□□ -0.3
PRDM2-208ENST00000487453 EDAQ92838 391 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 NTAN1Q96AB6 310 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 MSANTD3Q96H12 275 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 ZNF830Q96NB3 372 aaPredicted RBP13.2□□□□□ -0.3
PRDM2-208ENST00000487453 RPRD1AQ96P16 312 aaPredicted RBP13.2□□□□□ -0.3
PRDM2-208ENST00000487453 PEBP4Q96S96 227 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 LACRTQ9GZZ8 138 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 MFSD1Q9H3U5 465 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 C8orf33Q9H7E9 229 aaPredicted RBP13.2□□□□□ -0.3
PRDM2-208ENST00000487453 ZWILCHQ9H900 591 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 STIM2Q9P246 746 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 TRIM10Q9UDY6 481 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 USP18Q9UMW8 372 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 AP4E1Q9UPM8 1137 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 SNX10Q9Y5X0 201 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 ADGRG1Q9Y653 693 aa13.2□□□□□ -0.3
PRDM2-208ENST00000487453 MIA3Q5JRA6 1907 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 A0A0U1RQJ8 604 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 MACROD2A1Z1Q3 448 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 KRBA1A5PL33 1030 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 STK25O00506 426 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 TBL1XO60907 577 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 MAN1A1P33908 653 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 PCK1P35558 622 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 AIF1P55008 147 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 PRKCQQ04759 706 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 KDSRQ06136 332 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 SIGLEC14Q08ET2 396 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 AUHQ13825 339 aaKnown RBP13.19□□□□□ -0.3
PRDM2-208ENST00000487453 SMTNL2Q2TAL5 461 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 FYB2Q5VWT5 728 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 LRRC31Q6UY01 552 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 C12orf40Q86WS4 652 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 RALGPS2Q86X27 583 aaPredicted RBP13.19□□□□□ -0.3
PRDM2-208ENST00000487453 CIR1Q86X95 450 aaPredicted RBP13.19□□□□□ -0.3
PRDM2-208ENST00000487453 CPNE8Q86YQ8 564 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 ARFGAP1Q8N6T3 406 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 ATRIPQ8WXE1 791 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 HSPH1Q92598 858 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 TMA16Q96EY4 203 aaKnown RBP13.19□□□□□ -0.3
PRDM2-208ENST00000487453 MYEOVQ96EZ4 313 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 SHDQ96IW2 340 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 XPO6Q96QU8 1125 aaKnown RBP13.19□□□□□ -0.3
PRDM2-208ENST00000487453 HAPLN3Q96S86 360 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 PPP1R9BQ96SB3 815 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 PRMT1Q99873 361 aaKnown RBP13.19□□□□□ -0.3
PRDM2-208ENST00000487453 SNRNP25Q9BV90 132 aaKnown RBP13.19□□□□□ -0.3
PRDM2-208ENST00000487453 TSGA10Q9BZW7 698 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 KCNF1Q9H3M0 494 aa13.19□□□□□ -0.3
PRDM2-208ENST00000487453 DNAJC17Q9NVM6 304 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms