RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 NT5C3BQ969T7 300 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 FAM149B1Q96BN6 582 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 OLFM3Q96PB7 478 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 PPP1R10Q96QC0 940 aaKnown RBP26.91■■□□□ 1.9
HLA-C-208ENST00000487245 LRRC4Q9HBW1 653 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 SF3B1O75533 1304 aaKnown RBP eCLIP26.91■■□□□ 1.9
HLA-C-208ENST00000487245 GABRDO14764 452 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 GSC2O15499 205 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 STK10O94804 968 aaKnown RBP26.91■■□□□ 1.9
HLA-C-208ENST00000487245 MAP3K6O95382 1288 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 BEX3Q00994 111 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 HTR3CQ8WXA8 447 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 E2F7Q96AV8 911 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 DCLRE1BQ9H816 532 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 MOCS1Q9NZB8 636 aa26.91■■□□□ 1.9
HLA-C-208ENST00000487245 LIN7AO14910 233 aaPredicted RBP26.9■■□□□ 1.9
HLA-C-208ENST00000487245 FBXO21O94952 628 aa26.9■■□□□ 1.9
HLA-C-208ENST00000487245 MYL2P10916 166 aa26.9■■□□□ 1.9
HLA-C-208ENST00000487245 GCKP35557 465 aa26.9■■□□□ 1.9
HLA-C-208ENST00000487245 OCRLQ01968 901 aa26.9■■□□□ 1.9
HLA-C-208ENST00000487245 FSCN1Q16658 493 aaKnown RBP26.9■■□□□ 1.9
HLA-C-208ENST00000487245 TEX44Q53QW1 395 aa26.9■■□□□ 1.9
HLA-C-208ENST00000487245 BNIPLQ7Z465 357 aa26.9■■□□□ 1.9
HLA-C-208ENST00000487245 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP26.9■■□□□ 1.9
HLA-C-208ENST00000487245 MIEF2Q96C03 454 aa26.9■■□□□ 1.9
HLA-C-208ENST00000487245 NPY6RQ99463 290 aa26.9■■□□□ 1.9
HLA-C-208ENST00000487245 TRIP12Q14669 1992 aaPredicted RBP26.9■■□□□ 1.9
HLA-C-208ENST00000487245 M0QZ92 97 aa26.89■■□□□ 1.9
HLA-C-208ENST00000487245 PTGESO14684 152 aa26.89■■□□□ 1.9
HLA-C-208ENST00000487245 GOT1P17174 413 aa26.89■■□□□ 1.9
HLA-C-208ENST00000487245 FAM131BQ86XD5 332 aa26.89■■□□□ 1.9
HLA-C-208ENST00000487245 SIX6OS1Q8N1H7 587 aa26.89■■□□□ 1.9
HLA-C-208ENST00000487245 TMEM86AQ8N2M4 240 aa26.89■■□□□ 1.9
HLA-C-208ENST00000487245 SLC2A13Q96QE2 648 aa26.89■■□□□ 1.9
HLA-C-208ENST00000487245 A0A0A0MRY4 1105 aa26.89■■□□□ 1.89
HLA-C-208ENST00000487245 FCHO1O14526 889 aa26.89■■□□□ 1.89
HLA-C-208ENST00000487245 ALDH1A2O94788 518 aa26.89■■□□□ 1.89
HLA-C-208ENST00000487245 LUC7L3O95232 432 aaKnown RBP26.89■■□□□ 1.89
HLA-C-208ENST00000487245 AIF1P55008 147 aa26.89■■□□□ 1.89
HLA-C-208ENST00000487245 PURAQ00577 322 aaKnown RBP26.89■■□□□ 1.89
HLA-C-208ENST00000487245 BST1Q10588 318 aa26.89■■□□□ 1.89
HLA-C-208ENST00000487245 CCL14Q16627 93 aa26.89■■□□□ 1.89
HLA-C-208ENST00000487245 DCAF6Q58WW2 860 aa26.89■■□□□ 1.89
HLA-C-208ENST00000487245 SPATA13Q96N96 652 aa26.89■■□□□ 1.89
HLA-C-208ENST00000487245 MED10Q9BTT4 135 aa26.89■■□□□ 1.89
HLA-C-208ENST00000487245 EIF2B3Q9NR50 452 aaKnown RBP26.89■■□□□ 1.89
HLA-C-208ENST00000487245 UTRNP46939 3433 aa26.88■■□□□ 1.89
HLA-C-208ENST00000487245 HMX2A2RU54 273 aa26.88■■□□□ 1.89
HLA-C-208ENST00000487245 SNNO75324 88 aaPredicted RBP26.88■■□□□ 1.89
HLA-C-208ENST00000487245 LHX1P48742 406 aa26.88■■□□□ 1.89
HLA-C-208ENST00000487245 TAF1CQ15572 869 aaPredicted RBP26.88■■□□□ 1.89
HLA-C-208ENST00000487245 NBPF20Q3BBV1 942 aa26.88■■□□□ 1.89
HLA-C-208ENST00000487245 WSCD1Q658N2 575 aa26.88■■□□□ 1.89
HLA-C-208ENST00000487245 MARK2Q7KZI7 788 aaKnown RBP26.88■■□□□ 1.89
HLA-C-208ENST00000487245 ACMSDQ8TDX5 336 aa26.88■■□□□ 1.89
HLA-C-208ENST00000487245 SLC9A7Q96T83 725 aa26.88■■□□□ 1.89
HLA-C-208ENST00000487245 APBA2Q99767 749 aa26.88■■□□□ 1.89
HLA-C-208ENST00000487245 ARHGEF4Q9NR80 690 aa26.88■■□□□ 1.89
HLA-C-208ENST00000487245 FBXO6Q9NRD1 293 aaPredicted RBP26.88■■□□□ 1.89
HLA-C-208ENST00000487245 MANSC4A6NHS7 340 aaPredicted RBP26.87■■□□□ 1.89
HLA-C-208ENST00000487245 UGT1A9O60656 530 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 BPGMP07738 259 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 FAM200BP0CF97 657 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 CYP2B6P20813 491 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 MRPS6P82932 125 aaKnown RBP26.87■■□□□ 1.89
HLA-C-208ENST00000487245 NAB1Q13506 487 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 TRMT10BQ6PF06 316 aaKnown RBP26.87■■□□□ 1.89
HLA-C-208ENST00000487245 PAQR9Q6ZVX9 377 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 ARMC2Q8NEN0 867 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 TTC8Q8TAM2 541 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 RNF139Q8WU17 664 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 SOCS4Q8WXH5 440 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 WNT8BQ93098 351 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 MAGEB5Q9BZ81 275 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 UGT1A7Q9HAW7 530 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 UGT1A10Q9HAW8 530 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 UGT1A8Q9HAW9 530 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 GYG2O15488 501 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 OPHN1O60890 802 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 RARBP10826 455 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 NAA25Q14CX7 972 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 PDK1Q15118 436 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 TAF11Q15544 211 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 RSPH3Q86UC2 560 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 NUDCD3Q8IVD9 361 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 PYROXD2Q8N2H3 581 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 MPP5Q8N3R9 675 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 TSPYL2Q9H2G4 693 aaPredicted RBP26.87■■□□□ 1.89
HLA-C-208ENST00000487245 CHST12Q9NRB3 414 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 TRPV2Q9Y5S1 764 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 MAD1L1Q9Y6D9 718 aa26.87■■□□□ 1.89
HLA-C-208ENST00000487245 FAM237BA0A1B0GVD1 139 aa26.86■■□□□ 1.89
HLA-C-208ENST00000487245 ESRRAP11474 423 aaPredicted RBP26.86■■□□□ 1.89
HLA-C-208ENST00000487245 GLUD2P49448 558 aa26.86■■□□□ 1.89
HLA-C-208ENST00000487245 TMPRSS15P98073 1019 aa26.86■■□□□ 1.89
HLA-C-208ENST00000487245 BMPR2Q13873 1038 aa26.86■■□□□ 1.89
HLA-C-208ENST00000487245 KYAT3Q6YP21 454 aaKnown RBP26.86■■□□□ 1.89
HLA-C-208ENST00000487245 CLEC20AQ6ZU45 233 aa26.86■■□□□ 1.89
HLA-C-208ENST00000487245 CCNJLQ8IV13 435 aa26.86■■□□□ 1.89
HLA-C-208ENST00000487245 PRR11Q96HE9 360 aaPredicted RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms