RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 GPS2Q13227 327 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 SNX1Q13596 522 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 HLTFQ14527 1009 aaKnown RBP eCLIP7.45□□□□□ -1.22
CCNB3-206ENST00000487204 PAFAH1B3Q15102 231 aaKnown RBP7.45□□□□□ -1.22
CCNB3-206ENST00000487204 PDK1Q15118 436 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 OASLQ15646 514 aaKnown RBP7.45□□□□□ -1.22
CCNB3-206ENST00000487204 DUPD1Q68J44 220 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 LILRA6Q6PI73 481 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 FBXO38Q6PIJ6 1188 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 TMEM92Q6UXU6 159 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 HDXQ7Z353 690 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 DNAJB7Q7Z6W7 309 aaPredicted RBP7.45□□□□□ -1.22
CCNB3-206ENST00000487204 SPNS2Q8IVW8 549 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 ZDHHC14Q8IZN3 488 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 ALLCQ8N6M5 410 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 PLD5Q8N7P1 536 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 PCDH19Q8TAB3 1148 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 ADAM32Q8TC27 787 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 SPPL3Q8TCT6 385 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 MICAL1Q8TDZ2 1067 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 POF1BQ8WVV4 589 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 IFT81Q8WYA0 676 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 PPP2R3CQ969Q6 453 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 PLD4Q96BZ4 506 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 ACSF2Q96CM8 615 aaPredicted RBP7.45□□□□□ -1.22
CCNB3-206ENST00000487204 SNF8Q96H20 258 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 SLC39A13Q96H72 371 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 GCNAQ96QF7 691 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 CRISPLD1Q9H336 500 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 NMUR1Q9HB89 426 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 PCDH9Q9HC56 1237 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 ARHGEF4Q9NR80 690 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 MTMR10Q9NXD2 777 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 ASIC3Q9UHC3 531 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 MSRAQ9UJ68 235 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 DNPEPQ9ULA0 475 aa7.45□□□□□ -1.22
CCNB3-206ENST00000487204 ZNF840PA6NDX5 716 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 H3BNC9 293 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 H7C0C1 242 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 SGK1O00141 431 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 CREB3O43889 395 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 XYLBO75191 536 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 PAGE1O75459 146 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 SOAT2O75908 522 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 LATS1O95835 1130 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 IGLV3-27P01718 113 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 KRT14P02533 472 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 C8AP07357 584 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 RBP3P10745 1247 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 HMGA1P17096 107 aaKnown RBP7.44□□□□□ -1.22
CCNB3-206ENST00000487204 GOT1P17174 413 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 DDX6P26196 483 aaKnown RBP eCLIP7.44□□□□□ -1.22
CCNB3-206ENST00000487204 EPHB2P29323 1055 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 HOXC13P31276 330 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 ADCY8P40145 1251 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 ATP5OP48047 213 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 CDR1P51861 262 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 ATXN1P54253 815 aaKnown RBP7.44□□□□□ -1.22
CCNB3-206ENST00000487204 MLLT6P55198 1093 aaPredicted RBP7.44□□□□□ -1.22
CCNB3-206ENST00000487204 PITX1P78337 314 aaPredicted RBP7.44□□□□□ -1.22
CCNB3-206ENST00000487204 EFEMP1Q12805 493 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 MTMR3Q13615 1198 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 DPYSQ14117 519 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 SLMAPQ14BN4 828 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 CA9Q16790 459 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 P3H1Q32P28 736 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 RAB6CQ53S08 254 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 SLC45A4Q5BKX6 768 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 SPDYCQ5MJ68 293 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 PPM1LQ5SGD2 360 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 TTC27Q6P3X3 843 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 DARS2Q6PI48 645 aaKnown RBP7.44□□□□□ -1.22
CCNB3-206ENST00000487204 ANKS1BQ7Z6G8 1248 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 PQLC3Q8N755 202 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 KREMEN2Q8NCW0 462 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 GPR152Q8TDT2 470 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 TFB1MQ8WVM0 346 aaKnown RBP7.44□□□□□ -1.22
CCNB3-206ENST00000487204 ATG4AQ8WYN0 398 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 MRPS31Q92665 395 aaKnown RBP7.44□□□□□ -1.22
CCNB3-206ENST00000487204 CASP10Q92851 521 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 CAVIN3Q969G5 261 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 TBC1D31Q96DN5 1066 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 RTP4Q96DX8 246 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 FMO2Q99518 471 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 CDCA3Q99618 268 aaPredicted RBP7.44□□□□□ -1.22
CCNB3-206ENST00000487204 HERPUD2Q9BSE4 406 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 ADAM33Q9BZ11 813 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 FRMD8Q9BZ67 464 aaPredicted RBP7.44□□□□□ -1.22
CCNB3-206ENST00000487204 RAB6CQ9H0N0 254 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 EPC1Q9H2F5 836 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 VIPAS39Q9H9C1 493 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 HAUS2Q9NVX0 235 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 GPATCH2LQ9NWQ4 482 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 CALCOCO1Q9P1Z2 691 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 PAK5Q9P286 719 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 PPARGC1AQ9UBK2 798 aaKnown RBP7.44□□□□□ -1.22
CCNB3-206ENST00000487204 SFMBT1Q9UHJ3 866 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 ZNF510Q9Y2H8 683 aa7.44□□□□□ -1.22
CCNB3-206ENST00000487204 R3HDM2Q9Y2K5 976 aaKnown RBP7.44□□□□□ -1.22
CCNB3-206ENST00000487204 ALPK3Q96L96 1907 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms