RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 NDST2P52849 883 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 MRPS5P82675 430 aaKnown RBP6.41□□□□□ -1.38
VPS13D-209ENST00000487188 TAP1Q03518 808 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 C1orf220Q5T0J3 134 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 ZNF618Q5T7W0 954 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 METTL21CQ5VZV1 264 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 INTS5Q6P9B9 1019 aaKnown RBP6.41□□□□□ -1.38
VPS13D-209ENST00000487188 TMEM126BQ8IUX1 230 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 C12orf56Q8IXR9 622 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 HM13Q8TCT9 377 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 WNK4Q96J92 1243 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 EFCAB1Q9HAE3 211 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 MRPL40Q9NQ50 206 aaKnown RBP6.41□□□□□ -1.38
VPS13D-209ENST00000487188 GPRC5CQ9NQ84 441 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 CNTNAP2Q9UHC6 1331 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 TOGARAM1Q9Y4F4 1720 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 FAM189A1O60320 539 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 ZC3H11AO75152 810 aaKnown RBP eCLIP6.41□□□□□ -1.38
VPS13D-209ENST00000487188 SNNO75324 88 aaPredicted RBP6.41□□□□□ -1.38
VPS13D-209ENST00000487188 FUCA1P04066 466 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 TTKP33981 857 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 RPS6P62753 249 aaKnown RBP6.41□□□□□ -1.38
VPS13D-209ENST00000487188 TUBA4AP68366 448 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 CYP24A1Q07973 514 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 TFDP2Q14188 446 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 FAM182BQ5T319 152 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 TXNRD3NBQ6F5E7 133 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 GALNT18Q6P9A2 607 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 BBS12Q6ZW61 710 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 C10orf107Q8IVU9 208 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 PDZD8Q8NEN9 1154 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 TMC2Q8TDI7 906 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 ANKRD36BP1Q96IX9 119 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 SNX27Q96L92 541 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 CCDC17Q96LX7 622 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 FIZ1Q96SL8 496 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 CIB1Q99828 191 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 BEGAINQ9BUH8 593 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 FRMD8Q9BZ67 464 aaPredicted RBP6.41□□□□□ -1.38
VPS13D-209ENST00000487188 RIMS3Q9UJD0 308 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 ZNF229Q9UJW7 825 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 TTLL3Q9Y4R7 772 aa6.41□□□□□ -1.38
VPS13D-209ENST00000487188 PAPPAQ13219 1627 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 H3BNH8 94 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 TRDMT1O14717 391 aaKnown RBP6.4□□□□□ -1.38
VPS13D-209ENST00000487188 ADAM23O75077 832 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 CSH1P0DML2 217 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 CSH2P0DML3 217 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 EPHA3P29320 983 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 NRLP54845 237 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 CDH6P55285 790 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 SNRPFP62306 86 aaKnown RBP6.4□□□□□ -1.38
VPS13D-209ENST00000487188 YWHAZP63104 245 aaKnown RBP6.4□□□□□ -1.38
VPS13D-209ENST00000487188 NME3Q13232 169 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 CUL2Q13617 745 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 PRKG1Q13976 671 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 HSF5Q4G112 596 aaPredicted RBP6.4□□□□□ -1.38
VPS13D-209ENST00000487188 GPR180Q86V85 440 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 PHF13Q86YI8 300 aaPredicted RBP6.4□□□□□ -1.38
VPS13D-209ENST00000487188 THNSL1Q8IYQ7 743 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 SLC7A5P1Q8MH63 180 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 TDRD5Q8NAT2 981 aaKnown RBP6.4□□□□□ -1.38
VPS13D-209ENST00000487188 RIN3Q8TB24 985 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 ATP6V1E2Q96A05 226 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 SCYL1Q96KG9 808 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 C1orf50Q9BV19 199 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 CDC14AQ9UNH5 594 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 AURKCQ9UQB9 309 aa6.4□□□□□ -1.38
VPS13D-209ENST00000487188 RGSL1A5PLK6 1076 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF839A8K0R7 811 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 F5H423 210 aaPredicted RBP6.4□□□□□ -1.39
VPS13D-209ENST00000487188 TPP1O14773 563 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 PFDN6O15212 129 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 GRIN3BO60391 1043 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 RFPL1O75677 317 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 VAPBO95292 243 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 GNA12Q03113 381 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 MTX3Q5HYI7 312 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 FAM156AQ8NDB6 213 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 ZC3H15Q8WU90 426 aaKnown RBP6.4□□□□□ -1.39
VPS13D-209ENST00000487188 STARD8Q92502 1023 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 ATXN7L3BQ96GX2 97 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 WDR18Q9BV38 432 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 C20orf27Q9GZN8 174 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 MRPL46Q9H2W6 279 aaKnown RBP6.4□□□□□ -1.39
VPS13D-209ENST00000487188 COG4Q9H9E3 785 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 PKD2L2Q9NZM6 624 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 SUN2Q9UH99 717 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 DCDC2Q9UHG0 476 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 GIT1Q9Y2X7 761 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 ASTN2O75129 1339 aaPredicted RBP6.4□□□□□ -1.39
VPS13D-209ENST00000487188 BTAF1O14981 1849 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 DYTNA2CJ06 578 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 TMEM191CA6NGB0 347 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 CHADO15335 359 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 PSMD10O75832 226 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 FBXO21O94952 628 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 CFHP08603 1231 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 TMEM191BP0C7N4 346 aa6.4□□□□□ -1.39
VPS13D-209ENST00000487188 MAPTP10636 758 aaKnown RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms