RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	CCSER2	Q9H7U1	834 aa		13.64	□□□□□ -0.23
NR1H3-223	ENST00000486991	OSER1	Q9NX31	292 aa		13.64	□□□□□ -0.23
NR1H3-223	ENST00000486991	DUS2	Q9NX74	493 aa	Known RBP	13.64	□□□□□ -0.23
NR1H3-223	ENST00000486991	MYO1A	Q9UBC5	1043 aa		13.64	□□□□□ -0.23
NR1H3-223	ENST00000486991	STRIP2	Q9ULQ0	834 aa		13.64	□□□□□ -0.23
NR1H3-223	ENST00000486991	REXO2	Q9Y3B8	237 aa	Known RBP	13.64	□□□□□ -0.23
NR1H3-223	ENST00000486991	CPQ	Q9Y646	472 aa		13.64	□□□□□ -0.23
NR1H3-223	ENST00000486991	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
NR1H3-223	ENST00000486991	ANKRD62	A6NC57	917 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	SLC9A3R1	O14745	358 aa	Predicted RBP	13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	PAPSS1	O43252	624 aa	Predicted RBP	13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	ATMIN	O43313	823 aa	Predicted RBP	13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	FBXO21	O94952	628 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	ZBED1	O96006	694 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	ABL1	P00519	1130 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	RRM1	P23921	792 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	GABRB2	P47870	512 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	TUB	P50607	506 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	PLK5	Q496M5	336 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	FBXO43	Q4G163	708 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	PLA2G2C	Q5R387	149 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	XYLT1	Q86Y38	959 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	CLEC4C	Q8WTT0	213 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	NDRG1	Q92597	394 aa	Known RBP	13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	WBP2	Q969T9	261 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	VCPIP1	Q96JH7	1222 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	THAP2	Q9H0W7	228 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	FBXO44	Q9H4M3	255 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	ECT2	Q9H8V3	914 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	NMUR1	Q9HB89	426 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	SMPD4	Q9NXE4	827 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	CNOT8	Q9UFF9	292 aa	Known RBP	13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	RALY	Q9UKM9	306 aa	Known RBP	13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	ADGRG1	Q9Y653	693 aa		13.63	□□□□□ -0.23
NR1H3-223	ENST00000486991	SCAMP3	O14828	347 aa	Known RBP	13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	GREM1	O60565	184 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	NFATC1	O95644	943 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	CCDC175	P0C221	793 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	MYBL1	P10243	752 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	CHRM1	P11229	460 aa	Predicted RBP	13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	DEK	P35659	375 aa	Known RBP	13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	MPL	P40238	635 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	DAOA	P59103	153 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	DNAJC24	Q6P3W2	148 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	SFTPA1	Q8IWL2	248 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	ARHGEF26	Q96DR7	871 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	CNGB3	Q9NQW8	809 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	WDR35	Q9P2L0	1181 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	PYCARD	Q9ULZ3	195 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	TFR2	Q9UP52	801 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	SCML2	Q9UQR0	700 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	USP3	Q9Y6I4	520 aa		13.62	□□□□□ -0.23
NR1H3-223	ENST00000486991	CHD6	Q8TD26	2715 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	SART1	O43290	800 aa	Known RBP	13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	GJB6	O95452	261 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	CYP17A1	P05093	508 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	TMEM253	P0C7T8	217 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	MBL2	P11226	248 aa	Predicted RBP	13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	DRD1	P21728	446 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	VAV2	P52735	878 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	SEC13	P55735	322 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	RNASE9	P60153	205 aa	Known RBP	13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	SLC6A3	Q01959	620 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	DMC1	Q14565	340 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	HECTD3	Q5T447	861 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	PM20D1	Q6GTS8	502 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	OLFML1	Q6UWY5	402 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	BHLHA9	Q7RTU4	235 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	SCD5	Q86SK9	330 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	ZDHHC17	Q8IUH5	632 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	TXLNB	Q8N3L3	684 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	IRGQ	Q8WZA9	623 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	GOLGA1	Q92805	767 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	CD101	Q93033	1021 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	FAM149B1	Q96BN6	582 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	PIWIL1	Q96J94	861 aa	Known RBP	13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	LOXL4	Q96JB6	756 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	ZC3H10	Q96K80	434 aa	Known RBP	13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	SELENOO	Q9BVL4	669 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	TPSD1	Q9BZJ3	242 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	NACA2	Q9H009	215 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	METTL5	Q9NRN9	209 aa	Known RBP	13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	PARVA	Q9NVD7	372 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	CFAP97	Q9P2B7	532 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	TBC1D14	Q9P2M4	693 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	INTU	Q9ULD6	942 aa		13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	CNOT1	A5YKK6	2376 aa	Known RBP	13.61	□□□□□ -0.23
NR1H3-223	ENST00000486991	CCDC163	A0A0D9SF12	145 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991		A0A1W2PQH9	124 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	RCCD1	A6NED2	376 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	YJEFN3	A6XGL0	299 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991		E7ENQ6	273 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	GIPC1	O14908	333 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	TLR5	O60602	858 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	GRAP2	O75791	330 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	TBX18	O95935	607 aa		13.6	□□□□□ -0.23
NR1H3-223	ENST00000486991	CYP1A2	P05177	515 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms