RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 IGLV3-10A0A075B6K4 115 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 ZNF487B1APH4 448 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 ANHXE9PGG2 379 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 FAM72CH0Y354 149 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 KIF2AO00139 706 aaPredicted RBP9.91□□□□□ -0.82
MCF2L-227ENST00000486806 ACSL4O60488 711 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 KRT1P04264 644 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 TUBB4AP04350 444 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 CD48P09326 243 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 TNNT1P13805 278 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 L1CAMP32004 1257 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 GBP2P32456 591 aaPredicted RBP9.91□□□□□ -0.82
MCF2L-227ENST00000486806 GGCXP38435 758 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 VIPR2P41587 438 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 SLC11A2P49281 568 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 RWDD2BP57060 319 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 AMPD2Q01433 879 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 DPYSL3Q14195 570 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 RPS6KA1Q15418 735 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 TAZQ16635 292 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 FAM72AQ5TYM5 149 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 PAPD7Q5XG87 772 aaKnown RBP9.91□□□□□ -0.82
MCF2L-227ENST00000486806 FAM72DQ6L9T8 149 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 SYT10Q6XYQ8 523 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 OTOP3Q7RTS5 596 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 ANKS1BQ7Z6G8 1248 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 FAM72BQ86X60 149 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 DENND1CQ8IV53 801 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 BBS7Q8IWZ6 715 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 PYROXD2Q8N2H3 581 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 UBL4BQ8N7F7 174 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 EXD1Q8NHP7 514 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 HSPH1Q92598 858 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 FAF2Q96CS3 445 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 C1orf74Q96LT6 269 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 PRICKLE1Q96MT3 831 aaPredicted RBP9.91□□□□□ -0.82
MCF2L-227ENST00000486806 NAPGQ99747 312 aaPredicted RBP9.91□□□□□ -0.82
MCF2L-227ENST00000486806 ZNF670Q9BS34 389 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 PHF7Q9BWX1 381 aaPredicted RBP9.91□□□□□ -0.82
MCF2L-227ENST00000486806 MAGEB5Q9BZ81 275 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 DCLK3Q9C098 648 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 CARD9Q9H257 536 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 DHX35Q9H5Z1 703 aaKnown RBP9.91□□□□□ -0.82
MCF2L-227ENST00000486806 PCDH18Q9HCL0 1135 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 PRDM6Q9NQX0 595 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 RCOR3Q9P2K3 495 aaPredicted RBP9.91□□□□□ -0.82
MCF2L-227ENST00000486806 DNAI1Q9UI46 699 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 LSM7Q9UK45 103 aaKnown RBP9.91□□□□□ -0.82
MCF2L-227ENST00000486806 SNX12Q9UMY4 172 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 ZNF510Q9Y2H8 683 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.91□□□□□ -0.82
MCF2L-227ENST00000486806 SH3BP1Q9Y3L3 701 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 SNX10Q9Y5X0 201 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 HELZP42694 1942 aaKnown RBP9.91□□□□□ -0.82
MCF2L-227ENST00000486806 UNC80Q8N2C7 3258 aa9.91□□□□□ -0.82
MCF2L-227ENST00000486806 PRUNE2Q8WUY3 3088 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 KIF26AQ9ULI4 1882 aaPredicted RBP9.9□□□□□ -0.82
MCF2L-227ENST00000486806 CTAGE9A4FU28 777 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 HEPACAM2A8MVW5 462 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 C2CD4DB7Z1M9 353 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 E9PAM4 449 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 SCAMP3O14828 347 aaKnown RBP9.9□□□□□ -0.82
MCF2L-227ENST00000486806 ECI2O75521 394 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 LRIG2O94898 1065 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 TACR2P21452 398 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 KDELR1P24390 212 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 IL4RP24394 825 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 SLC6A4P31645 630 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 HTR7P34969 479 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 PTPN7P35236 360 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 CDKN2BP42772 138 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 DNA2P51530 1060 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 ZNF135P52742 658 aaPredicted RBP9.9□□□□□ -0.82
MCF2L-227ENST00000486806 MLLT6P55198 1093 aaPredicted RBP9.9□□□□□ -0.82
MCF2L-227ENST00000486806 CDH6P55285 790 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 TFF2Q03403 129 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 FCHO2Q0JRZ9 810 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 HTR4Q13639 388 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 AUHQ13825 339 aaKnown RBP9.9□□□□□ -0.82
MCF2L-227ENST00000486806 DPYSQ14117 519 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 PDK2Q15119 407 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 PPP2R5EQ16537 467 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 PUS10Q3MIT2 529 aaKnown RBP9.9□□□□□ -0.82
MCF2L-227ENST00000486806 C5orf22Q49AR2 442 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 ADGRF1Q5T601 910 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 RAP1GAP2Q684P5 730 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 RNF43Q68DV7 783 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 TANGO2Q6ICL3 276 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 PTCRAQ6ISU1 281 aaPredicted RBP9.9□□□□□ -0.82
MCF2L-227ENST00000486806 PARM1Q6UWI2 310 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 MFSD7Q6UXD7 560 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 VITQ6UXI7 678 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 CHSY1Q86X52 802 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 CPXM2Q8N436 756 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 TDRD5Q8NAT2 981 aaKnown RBP9.9□□□□□ -0.82
MCF2L-227ENST00000486806 BPIFB1Q8TDL5 484 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 FGF14Q92915 247 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 E2F7Q96AV8 911 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 ELSPBP1Q96BH3 223 aa9.9□□□□□ -0.82
MCF2L-227ENST00000486806 MYEOVQ96EZ4 313 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms