RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 XPO4Q9C0E2 1151 aaKnown RBP18.88■□□□□ 0.61
COL1A1-207ENST00000486572 NUCKS1Q9H1E3 243 aaKnown RBP18.88■□□□□ 0.61
COL1A1-207ENST00000486572 METTL5Q9NRN9 209 aaKnown RBP18.88■□□□□ 0.61
COL1A1-207ENST00000486572 POLR3BQ9NW08 1133 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-207ENST00000486572 ADAM22Q9P0K1 906 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 SLC12A6Q9UHW9 1150 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 XPO7Q9UIA9 1087 aaKnown RBP18.88■□□□□ 0.61
COL1A1-207ENST00000486572 CLEC4EQ9ULY5 219 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 STARD13Q9Y3M8 1113 aa18.88■□□□□ 0.61
COL1A1-207ENST00000486572 KCNU1A8MYU2 1149 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 PRRT4C9JH25 899 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 TBL1XO60907 577 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 CALB1P05937 261 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 PRKCIP41743 596 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 GSCP56915 257 aaPredicted RBP18.87■□□□□ 0.61
COL1A1-207ENST00000486572 DMWDQ09019 674 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 PTP4A2Q12974 167 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 SLC25A52Q3SY17 297 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 MS4A13Q5J8X5 152 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 RNF43Q68DV7 783 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 MON1BQ7L1V2 547 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 ANKS1BQ7Z6G8 1248 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 CHSY1Q86X52 802 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 FANCMQ8IYD8 2048 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 TXNDC5Q8NBS9 432 aaKnown RBP18.87■□□□□ 0.61
COL1A1-207ENST00000486572 OLIG1Q8TAK6 271 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 ATG2BQ96BY7 2078 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 PGAP3Q96FM1 320 aaPredicted RBP18.87■□□□□ 0.61
COL1A1-207ENST00000486572 HHIPQ96QV1 700 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 SEMA4AQ9H3S1 761 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 TMEM51Q9NW97 253 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 CALCOCO1Q9P1Z2 691 aa18.87■□□□□ 0.61
COL1A1-207ENST00000486572 ITIH6Q6UXX5 1313 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 CBFA2T2O43439 604 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 LILRB5O75023 590 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 F9P00740 461 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 TFE3P19532 575 aaPredicted RBP18.86■□□□□ 0.61
COL1A1-207ENST00000486572 TACR2P21452 398 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 TNFAIP3P21580 790 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 HOXC13P31276 330 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 FNTBP49356 437 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 C1QBPQ07021 282 aaKnown RBP18.86■□□□□ 0.61
COL1A1-207ENST00000486572 KLHL30Q0D2K2 578 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 GEN1Q17RS7 908 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 EOGTQ5NDL2 527 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 RAP1GAP2Q684P5 730 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 HEATR6Q6AI08 1181 aaKnown RBP18.86■□□□□ 0.61
COL1A1-207ENST00000486572 TRNP1Q6NT89 227 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 PPP1R2P3Q6NXS1 205 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 SND1Q7KZF4 910 aaKnown RBP eCLIP18.86■□□□□ 0.61
COL1A1-207ENST00000486572 LONP2Q86WA8 852 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 ZNF557Q8N988 423 aaPredicted RBP18.86■□□□□ 0.61
COL1A1-207ENST00000486572 NKD2Q969F2 451 aaPredicted RBP18.86■□□□□ 0.61
COL1A1-207ENST00000486572 TBCBQ99426 244 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 ADAM33Q9BZ11 813 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 HAUS4Q9H6D7 363 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 ZDHHC4Q9NPG8 344 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 PIGVQ9NUD9 493 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 PAXBP1Q9Y5B6 917 aa18.86■□□□□ 0.61
COL1A1-207ENST00000486572 CCDC163A0A0D9SF12 145 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 F5H5T6 163 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 SGK1O00141 431 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 APBB3O95704 486 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 CXCR3P49682 368 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 DGKEP52429 567 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 RPS24P62847 133 aaKnown RBP18.85■□□□□ 0.61
COL1A1-207ENST00000486572 DEUP1Q05D60 604 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 EIF4HQ15056 248 aaKnown RBP18.85■□□□□ 0.61
COL1A1-207ENST00000486572 CRY1Q16526 586 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 BRMS1LQ5PSV4 323 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 EGFLAMQ63HQ2 1017 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 ACAD10Q6JQN1 1059 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 PHLDB2Q86SQ0 1253 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 LGI2Q8N0V4 545 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 EMC1Q8N766 993 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 C3orf20Q8ND61 904 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 TSTD1Q8NFU3 115 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 SYN2Q92777 582 aaPredicted RBP18.85■□□□□ 0.61
COL1A1-207ENST00000486572 MYEOVQ96EZ4 313 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 CFAP57Q96MR6 1250 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 HCN2Q9UL51 889 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 CAPN11Q9UMQ6 739 aa18.85■□□□□ 0.61
COL1A1-207ENST00000486572 ADAM23O75077 832 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 GYPCP04921 128 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 KRT3P12035 628 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 HLA-FP30511 346 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 NTSR1P30989 418 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 PXNP49023 591 aaPredicted RBP18.84■□□□□ 0.61
COL1A1-207ENST00000486572 ZBED6P86452 979 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 ZNF571Q7Z3V5 609 aaPredicted RBP18.84■□□□□ 0.61
COL1A1-207ENST00000486572 WDR5BQ86VZ2 330 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 MFN1Q8IWA4 741 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 CHPFQ8IZ52 775 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL1A1-207ENST00000486572 WFIKKN2Q8TEU8 576 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 UCMAQ8WVF2 138 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 CPLX3Q8WVH0 158 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 PRMT1Q99873 361 aaKnown RBP18.84■□□□□ 0.61
COL1A1-207ENST00000486572 SELENOOQ9BVL4 669 aa18.84■□□□□ 0.61
COL1A1-207ENST00000486572 WDCPQ9H6R7 721 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms