RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 IER5LQ5T953 404 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 RAP1GAP2Q684P5 730 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 LRRC31Q6UY01 552 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 SLFN11Q7Z7L1 901 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 ADGRG2Q8IZP9 1017 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 CPXM2Q8N436 756 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 DDI1Q8WTU0 396 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 SLC39A7Q92504 469 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 MSANTD3Q96H12 275 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 BTBD6Q96KE9 485 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 XPO6Q96QU8 1125 aaKnown RBP11.8□□□□□ -0.52
NUP50-216ENST00000486184 BBS2Q9BXC9 721 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 ADAM33Q9BZ11 813 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 TSGA10Q9BZW7 698 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 TRIM7Q9C029 511 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 SIK2Q9H0K1 926 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 C8orf33Q9H7E9 229 aaPredicted RBP11.8□□□□□ -0.52
NUP50-216ENST00000486184 HPS4Q9NQG7 708 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 HEBP1Q9NRV9 189 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 ARHGEF38Q9NXL2 777 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 CALCOCO1Q9P1Z2 691 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 CA14Q9ULX7 337 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 PIAS3Q9Y6X2 628 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 COL4A3Q01955 1670 aa11.8□□□□□ -0.52
NUP50-216ENST00000486184 DOCK4Q8N1I0 1966 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 A0A0A6YYK5 440 aaPredicted RBP11.79□□□□□ -0.52
NUP50-216ENST00000486184 GOLGA6L7A0A1B0GV03 622 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 KRT86O43790 486 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 TSPAN3O60637 253 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 PAGE1O75459 146 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 PROSCO94903 275 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 GLULP15104 373 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 TACR2P21452 398 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 PCK1P35558 622 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 ZXDAP98168 799 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 ZNF252P-AS1Q0IIN9 211 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 EIF4EBP2Q13542 120 aaPredicted RBP11.79□□□□□ -0.52
NUP50-216ENST00000486184 MLF2Q15773 248 aaPredicted RBP11.79□□□□□ -0.52
NUP50-216ENST00000486184 SLC44A4Q53GD3 710 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 MS4A13Q5J8X5 152 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 RFWD3Q6PCD5 774 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 C1orf228Q6PIY5 440 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 TPRG1Q6ZUI0 275 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 BNIPLQ7Z465 357 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 FAM217AQ8IXS0 508 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 LGI2Q8N0V4 545 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 NIPA2Q8N8Q9 360 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 HJURPQ8NCD3 748 aaPredicted RBP11.79□□□□□ -0.52
NUP50-216ENST00000486184 BHMTQ93088 406 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 NTAN1Q96AB6 310 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 TMA16Q96EY4 203 aaKnown RBP11.79□□□□□ -0.52
NUP50-216ENST00000486184 SHDQ96IW2 340 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 HAPLN3Q96S86 360 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 IRX2Q9BZI1 471 aaPredicted RBP11.79□□□□□ -0.52
NUP50-216ENST00000486184 ARHGEF3Q9NR81 526 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 WNT16Q9UBV4 365 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 PCSK1NQ9UHG2 260 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 STOML2Q9UJZ1 356 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 TFR2Q9UP52 801 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 REXO2Q9Y3B8 237 aaKnown RBP11.79□□□□□ -0.52
NUP50-216ENST00000486184 ADGRG1Q9Y653 693 aa11.79□□□□□ -0.52
NUP50-216ENST00000486184 SPTBN5Q9NRC6 3674 aaKnown RBP11.79□□□□□ -0.52
NUP50-216ENST00000486184 BTNL10A8MVZ5 291 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.78□□□□□ -0.52
NUP50-216ENST00000486184 SPECC1L-ADORA2AF8WAN1 911 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 ARNTLO00327 626 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 MAN2B1O00754 1011 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 TRDMT1O14717 391 aaKnown RBP11.78□□□□□ -0.52
NUP50-216ENST00000486184 PJA2O43164 708 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 SPOPO43791 374 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 TBL1XO60907 577 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 LRCH4O75427 683 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 MTA2O94776 668 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 TYRP14679 529 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 MIPP30301 263 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 MAN1A1P33908 653 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 GJA4P35212 333 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 ADRA1BP35368 520 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 GJC1P36383 396 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 PRKCQQ04759 706 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 SIGLEC14Q08ET2 396 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 TCEAL1Q15170 157 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 PREPLQ4J6C6 727 aaPredicted RBP11.78□□□□□ -0.52
NUP50-216ENST00000486184 RAB6CQ53S08 254 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 ODF2Q5BJF6 829 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 FAM133BQ5BKY9 247 aaKnown RBP11.78□□□□□ -0.52
NUP50-216ENST00000486184 ZFYVE27Q5T4F4 411 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 PIK3R6Q5UE93 754 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 TTC39BQ5VTQ0 682 aaPredicted RBP11.78□□□□□ -0.52
NUP50-216ENST00000486184 NADSYN1Q6IA69 706 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 RHBDF2Q6PJF5 856 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 RALGPS2Q86X27 583 aaPredicted RBP11.78□□□□□ -0.52
NUP50-216ENST00000486184 TMEM25Q86YD3 366 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 SIX5Q8N196 739 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 CCDC185Q8N715 623 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 EDAQ92838 391 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 RPRD1AQ96P16 312 aaPredicted RBP11.78□□□□□ -0.52
NUP50-216ENST00000486184 PPP1R9BQ96SB3 815 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 RAB6CQ9H0N0 254 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 MFSD1Q9H3U5 465 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms