RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 TEX33O43247 280 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 MOCS2O96007 188 aaPredicted RBP17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 RETP07949 1114 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 GLI1P08151 1106 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 HOXB2P14652 356 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 TFE3P19532 575 aaPredicted RBP17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 GABRB2P47870 512 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 SLC11A2P49281 568 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 RPS24P62847 133 aaKnown RBP17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 NOMO3P69849 1222 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 FMO1Q01740 532 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 SLC6A3Q01959 620 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 ENPP2Q13822 863 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 FKBP15Q5T1M5 1219 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 TRNP1Q6NT89 227 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 NUDT18Q6ZVK8 323 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 SLC26A9Q7LBE3 791 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 CACNA2D4Q7Z3S7 1137 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 CHPFQ8IZ52 775 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 TMEM35BQ8NCS4 154 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 HMGB4Q8WW32 186 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 SLC6A17Q9H1V8 727 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 THAP10Q9P2Z0 257 aaPredicted RBP17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 GMEB2Q9UKD1 530 aa17.28■□□□□ 0.36
CCHCR1-214ENST00000486060 TBL1XO60907 577 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 HSF2BPO75031 334 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 DAB1O75553 588 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 SOX5P35711 763 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 IL12RB1P42701 662 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 UBXN1Q04323 297 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 IQCB1Q15051 598 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 KLHL40Q2TBA0 621 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 MS4A13Q5J8X5 152 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 EFHC1Q5JVL4 640 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 TRMT11Q7Z4G4 463 aaKnown RBP17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 ANKS1BQ7Z6G8 1248 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 ADIPOR2Q86V24 386 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 XYLT1Q86Y38 959 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 ZNF397Q8NF99 534 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 IPO4Q8TEX9 1081 aaKnown RBP17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 CPA5Q8WXQ8 436 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 NOX5Q96PH1 765 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 TRIM62Q9BVG3 475 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 POLMQ9NP87 494 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 CD93Q9NPY3 652 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 ELOVL2Q9NXB9 296 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 MBD1Q9UIS9 605 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 STON1Q9Y6Q2 735 aa17.27■□□□□ 0.36
CCHCR1-214ENST00000486060 KCNU1A8MYU2 1149 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 I6L893 689 aaPredicted RBP17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 EPN2O95208 641 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 CYP1A1P04798 512 aaPredicted RBP17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 TPM2P07951 284 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 CDK11BP21127 795 aaKnown RBP17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 CD70P32970 193 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 P2RY2P41231 377 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 ZNF445P59923 1031 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 ZNF234Q14588 700 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 CCDC6Q16204 474 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 MAP7D1Q3KQU3 841 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 MPP7Q5T2T1 576 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 NAA35Q5VZE5 725 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 RAP1GAP2Q684P5 730 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 CFAP52Q8N1V2 620 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 PCDHB18PQ96TA0 734 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 PRMT1Q99873 361 aaKnown RBP17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 ANLNQ9NQW6 1124 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 ABCB8Q9NUT2 735 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 STIM2Q9P246 746 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 INTS6Q9UL03 887 aaKnown RBP17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 CEP83Q9Y592 693 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 CHD5Q8TDI0 1954 aa17.26■□□□□ 0.35
CCHCR1-214ENST00000486060 SYNJ2BP-COX16A0A087WUM0 186 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 SYCE3A1L190 88 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 NDUFV2P19404 249 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 TACR2P21452 398 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 PRKCHP24723 683 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 CDK17Q00537 523 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 CDR2Q01850 454 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 FSCBQ5H9T9 825 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 ERICH1Q86X53 443 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 ANKRD20A12PQ8NF67 263 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 NEK11Q8NG66 645 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 CYB5D2Q8WUJ1 264 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 NT5C3BQ969T7 300 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 RMDN1Q96DB5 314 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 C18orf8Q96DM3 657 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 NPY6RQ99463 290 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 IRX2Q9BZI1 471 aaPredicted RBP17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 ARRDC1-AS1Q9H2J1 176 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 PDCL3Q9H2J4 239 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 FAM204AQ9H8W3 233 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 RTN4Q9NQC3 1192 aaKnown RBP17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 DDIT4Q9NX09 232 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 COX16Q9P0S2 106 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 GGA2Q9UJY4 613 aa17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.25■□□□□ 0.35
CCHCR1-214ENST00000486060 ALDH1A2O94788 518 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms