RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 SRRTQ9BXP5 876 aaKnown RBP10.33□□□□□ -0.76
SND1-213ENST00000486037 OSGEPQ9NPF4 335 aa10.33□□□□□ -0.76
SND1-213ENST00000486037 KCNK4Q9NYG8 393 aa10.33□□□□□ -0.76
SND1-213ENST00000486037 LARSQ9P2J5 1176 aaKnown RBP10.33□□□□□ -0.76
SND1-213ENST00000486037 SIX4Q9UIU6 781 aa10.33□□□□□ -0.76
SND1-213ENST00000486037 UBE4BO95155 1302 aa10.33□□□□□ -0.76
SND1-213ENST00000486037 USP9YO00507 2555 aaPredicted RBP10.32□□□□□ -0.76
SND1-213ENST00000486037 K7ENM7 598 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 TGFB1I1O43294 461 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 TSPAN3O60637 253 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 FSBPO95073 299 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 PDGFRBP09619 1106 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 ANXA13P27216 316 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 PCSK1P29120 753 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 PPP3CCP48454 512 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 UCNP55089 124 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 LRRC63Q05C16 580 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 BNIP3Q12983 259 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 STARD3Q14849 445 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 GEN1Q17RS7 908 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 KNOP1Q1ED39 458 aaKnown RBP10.32□□□□□ -0.76
SND1-213ENST00000486037 INAVAQ3KP66 663 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 C4orf50Q6ZRC1 276 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 ZC3H3Q8IXZ2 948 aaKnown RBP10.32□□□□□ -0.76
SND1-213ENST00000486037 CSGALNACT2Q8N6G5 542 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 KCNE4Q8WWG9 221 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 SORCS1Q8WY21 1168 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 RFFLQ8WZ73 363 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 PRCCQ92733 491 aaPredicted RBP10.32□□□□□ -0.76
SND1-213ENST00000486037 SLC6A18Q96N87 628 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 ELF4Q99607 663 aaPredicted RBP10.32□□□□□ -0.76
SND1-213ENST00000486037 TSG101Q99816 390 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 TRIM5Q9C035 493 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 FAM117AQ9C073 453 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 XPO4Q9C0E2 1151 aaKnown RBP10.32□□□□□ -0.76
SND1-213ENST00000486037 ST6GALNAC4Q9H4F1 302 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 THAP9Q9H5L6 903 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 EBF2Q9HAK2 575 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 RYDENQ9NUL5 291 aaKnown RBP10.32□□□□□ -0.76
SND1-213ENST00000486037 GDAP2Q9NXN4 497 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 HSPBP1Q9NZL4 362 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 MARK1Q9P0L2 795 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 IFNKQ9P0W0 207 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 THAP10Q9P2Z0 257 aaPredicted RBP10.32□□□□□ -0.76
SND1-213ENST00000486037 CHORDC1Q9UHD1 332 aaPredicted RBP10.32□□□□□ -0.76
SND1-213ENST00000486037 CLCA2Q9UQC9 943 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 HEMK1Q9Y5R4 338 aaPredicted RBP10.32□□□□□ -0.76
SND1-213ENST00000486037 TLN1Q9Y490 2541 aaKnown RBP10.32□□□□□ -0.76
SND1-213ENST00000486037 PTPRJQ12913 1337 aa10.32□□□□□ -0.76
SND1-213ENST00000486037 K7ENP7 123 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 CLDN5O00501 218 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 WNT9AO14904 365 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 KRT38O76015 456 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 KIF20AO95235 890 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 TBX18O95935 607 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 ITGAVP06756 1048 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 CDK11BP21127 795 aaKnown RBP10.31□□□□□ -0.76
SND1-213ENST00000486037 ACO1P21399 889 aaKnown RBP10.31□□□□□ -0.76
SND1-213ENST00000486037 PNPLA4P41247 253 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 LHX1P48742 406 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 TFAMQ00059 246 aaKnown RBP10.31□□□□□ -0.76
SND1-213ENST00000486037 GTF2BQ00403 316 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 ORC1Q13415 861 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 ALCAMQ13740 583 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 KCNJ12Q14500 433 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 ZNF234Q14588 700 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 LINC00303Q3SY05 128 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 MDH1BQ5I0G3 518 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 TDRD10Q5VZ19 366 aaKnown RBP10.31□□□□□ -0.76
SND1-213ENST00000486037 INO80CQ6PI98 192 aaPredicted RBP10.31□□□□□ -0.76
SND1-213ENST00000486037 ZNF574Q6ZN55 896 aaPredicted RBP10.31□□□□□ -0.76
SND1-213ENST00000486037 STXBP4Q6ZWJ1 553 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 LIMS2Q7Z4I7 341 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 TOP6BLQ8N6T0 577 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 RBBP8NLQ8NC74 664 aaPredicted RBP10.31□□□□□ -0.76
SND1-213ENST00000486037 SCAMP5Q8TAC9 235 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 NOC3LQ8WTT2 800 aaKnown RBP10.31□□□□□ -0.76
SND1-213ENST00000486037 ANP32BQ92688 251 aaKnown RBP10.31□□□□□ -0.76
SND1-213ENST00000486037 FBXO32Q969P5 355 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 EEF2KMTQ96G04 330 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 C8orf48Q96LL4 319 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 ZNF578Q96N58 590 aaPredicted RBP10.31□□□□□ -0.76
SND1-213ENST00000486037 NAP1L5Q96NT1 182 aaPredicted RBP10.31□□□□□ -0.76
SND1-213ENST00000486037 XPO6Q96QU8 1125 aaKnown RBP10.31□□□□□ -0.76
SND1-213ENST00000486037 ZNF518BQ9C0D4 1074 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 INTS13Q9NVM9 706 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 LIMA1Q9UHB6 759 aaKnown RBP10.31□□□□□ -0.76
SND1-213ENST00000486037 FBXO10Q9UK96 956 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 AGO2Q9UKV8 859 aaKnown RBP10.31□□□□□ -0.76
SND1-213ENST00000486037 CDH9Q9ULB4 789 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 TRAF3IP3Q9Y228 551 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 PCDHB13Q9Y5F0 798 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 MYH10P35580 1976 aa10.31□□□□□ -0.76
SND1-213ENST00000486037 A0A1W2PNU3 283 aaPredicted RBP10.3□□□□□ -0.76
SND1-213ENST00000486037 PDXKO00764 312 aa10.3□□□□□ -0.76
SND1-213ENST00000486037 MT-CO3P00414 261 aa10.3□□□□□ -0.76
SND1-213ENST00000486037 SERPINC1P01008 464 aa10.3□□□□□ -0.76
SND1-213ENST00000486037 IGHV4-34P06331 123 aa10.3□□□□□ -0.76
SND1-213ENST00000486037 ACADMP11310 421 aa10.3□□□□□ -0.76
SND1-213ENST00000486037 CDK4P11802 303 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms