RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 GABRB2P47870 512 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 PPP3CCP48454 512 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 RPL34P49207 117 aaKnown RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 YWHAZP63104 245 aaKnown RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 PITX1P78337 314 aaPredicted RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 CCZ1BP86790 482 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 CCZ1P86791 482 aaPredicted RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 ATP11AP98196 1134 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 DEUP1Q05D60 604 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 NME3Q13232 169 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 MESDQ14696 234 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 C15orf59Q2T9L4 293 aaPredicted RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 TUSC1Q2TAM9 212 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 LEXMQ3ZCV2 418 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 SYPL2Q5VXT5 272 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 PM20D1Q6GTS8 502 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 PPP1R2P3Q6NXS1 205 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 SCYL2Q6P3W7 929 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 BHLHA9Q7RTU4 235 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 TADA2BQ86TJ2 420 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 ZDHHC17Q8IUH5 632 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 TDRD5Q8NAT2 981 aaKnown RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 C3orf20Q8ND61 904 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 CCDC112Q8NEF3 446 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 ZSCAN18Q8TBC5 510 aaPredicted RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 RXFP2Q8WXD0 754 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 ATRIPQ8WXE1 791 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 OVCA2Q8WZ82 227 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 IRGQQ8WZA9 623 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 FGF13Q92913 245 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 ACSF2Q96CM8 615 aaPredicted RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 PDLIM2Q96JY6 352 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 MYRFLQ96LU7 910 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 CEP295NLQ96MC4 621 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 ZSWIM3Q96MP5 696 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 CFAP57Q96MR6 1250 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 NECTIN4Q96NY8 510 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 SLC22A12Q96S37 553 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 PPP1R9BQ96SB3 815 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 EIF3CQ99613 913 aaKnown RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 NUP85Q9BW27 656 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 SLC46A2Q9BY10 475 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 TRIM7Q9C029 511 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 RNF38Q9H0F5 515 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 ISCUQ9H1K1 167 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 KCNF1Q9H3M0 494 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 TASP1Q9H6P5 420 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 FAM204AQ9H8W3 233 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 OSGEPQ9NPF4 335 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 LUC7LQ9NQ29 371 aaKnown RBP5.87□□□□□ -1.47
COPS3-208ENST00000486032 GKN1Q9NS71 199 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 ABCC13Q9NSE7 274 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 PARVAQ9NVD7 372 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 IL37Q9NZH6 218 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 RAPGEFL1Q9UHV5 662 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 CDH7Q9ULB5 785 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 CPQQ9Y646 472 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 SCINQ9Y6U3 715 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 NOTCH4Q99466 2003 aa5.87□□□□□ -1.47
COPS3-208ENST00000486032 TTC28Q96AY4 2481 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 NCANO14594 1321 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 FAM92AA1XBS5 289 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 SIGLEC16A6NMB1 481 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 C2CD4DB7Z1M9 353 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 CCP110O43303 1012 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 PRAMEF12O95522 483 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 TRUB2O95900 331 aaKnown RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 OAS1P00973 400 aaKnown RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 FYNP06241 537 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 POU2F2P09086 479 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 TMEM253P0C7T8 217 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 ZDHHC11BP0C7U3 371 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 MYBL1P10243 752 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 TNNT1P13805 278 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 DESP17661 470 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 TFE3P19532 575 aaPredicted RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 PSMA2P25787 234 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 DDX6P26196 483 aaKnown RBP eCLIP5.86□□□□□ -1.47
COPS3-208ENST00000486032 NOS2P35228 1153 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 RFC1P35251 1148 aaPredicted RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 VIPR2P41587 438 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 MATKP42679 507 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 ATXN1P54253 815 aaKnown RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 EPHA5P54756 1037 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 TBX4P57082 545 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 RPL7AP62424 266 aaKnown RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 KRT83P78385 493 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 MAMLD1Q13495 774 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 GRM2Q14416 872 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 RAB6CQ53S08 254 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 ZFYVE27Q5T4F4 411 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 SH3PXD2AQ5TCZ1 1133 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 DAB2IPQ5VWQ8 1189 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 TRNP1Q6NT89 227 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 FIGNL1Q6PIW4 674 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 SLC26A9Q7LBE3 791 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 OTOP3Q7RTS5 596 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 TAC4Q86UU9 113 aa5.86□□□□□ -1.47
COPS3-208ENST00000486032 ARID3BQ8IVW6 561 aaPredicted RBP5.86□□□□□ -1.47
COPS3-208ENST00000486032 YAF2Q8IY57 180 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms