RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 MTF1Q14872 753 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 ADCK5Q3MIX3 580 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 NT5DC1Q5TFE4 455 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 ATF7IP2Q5U623 682 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 PCSK4Q6UW60 755 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 MAB21L3Q8N8X9 362 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 MCPH1Q8NEM0 835 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 PIGOQ8TEQ8 1089 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 ATP2A3Q93084 1043 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 HSD17B14Q9BPX1 270 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.12□□□□□ -1.27
SMC4-217ENST00000485867 CDT1Q9H211 546 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 TIMM13Q9Y5L4 95 aaPredicted RBP7.12□□□□□ -1.27
SMC4-217ENST00000485867 TMEM131Q92545 1883 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 ATMQ13315 3056 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 TEP1Q99973 2627 aaKnown RBP7.11□□□□□ -1.27
SMC4-217ENST00000485867 TMEM82A0PJX8 343 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 CAPN8A6NHC0 703 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 PYCARD-AS1I3L0S3 204 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 SGK1O00141 431 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 AP5Z1O43299 807 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 IFNAR1P17181 557 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 DDX6P26196 483 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMC4-217ENST00000485867 NMT1P30419 496 aaKnown RBP7.11□□□□□ -1.27
SMC4-217ENST00000485867 EIF4A3P38919 411 aaKnown RBP7.11□□□□□ -1.27
SMC4-217ENST00000485867 OPRD1P41143 372 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 NAMPTP43490 491 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 IFNAR2P48551 515 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 AARSP49588 968 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMC4-217ENST00000485867 OSTNP61366 133 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 MRPS21P82921 87 aaKnown RBP7.11□□□□□ -1.27
SMC4-217ENST00000485867 ZNF33AQ06730 810 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 BYSLQ13895 437 aaKnown RBP7.11□□□□□ -1.27
SMC4-217ENST00000485867 MYBPC2Q14324 1141 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 VEPH1Q14D04 833 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 ZNF77Q15935 545 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 CDCP2Q5VXM1 449 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 TXNDC8Q6A555 127 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 OVOS1Q6IE37 1185 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 TMC3Q7Z5M5 1100 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 APBB1IPQ7Z5R6 666 aaPredicted RBP7.11□□□□□ -1.27
SMC4-217ENST00000485867 NEK8Q86SG6 692 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 DEFB119Q8N690 84 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 ZNF655Q8N720 491 aaPredicted RBP7.11□□□□□ -1.27
SMC4-217ENST00000485867 DEPTORQ8TB45 409 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 OSCP1Q8WVF1 389 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 HMGB4Q8WW32 186 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 TCTN2Q96GX1 697 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 FCRL3Q96P31 734 aaPredicted RBP7.11□□□□□ -1.27
SMC4-217ENST00000485867 KIFC3Q9BVG8 833 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 FOXP3Q9BZS1 431 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 DUS2Q9NX74 493 aaKnown RBP7.11□□□□□ -1.27
SMC4-217ENST00000485867 BCCIPQ9P287 314 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMC4-217ENST00000485867 HSFX1Q9UBD0 423 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 TUBGCP4Q9UGJ1 667 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 TNFSF13BQ9Y275 285 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 WNT6Q9Y6F9 365 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 MYO9AB2RTY4 2548 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 MYH11P35749 1972 aa7.11□□□□□ -1.27
SMC4-217ENST00000485867 TP53BP1Q12888 1972 aaPredicted RBP7.11□□□□□ -1.27
SMC4-217ENST00000485867 A0A1W2PQD8 194 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 FAM149AA5PLN7 773 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 TLX3O43711 291 aaPredicted RBP7.1□□□□□ -1.27
SMC4-217ENST00000485867 CCNT1O60563 726 aaKnown RBP7.1□□□□□ -1.27
SMC4-217ENST00000485867 KLF8O95600 359 aaPredicted RBP7.1□□□□□ -1.27
SMC4-217ENST00000485867 INHBBP09529 407 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 ATXN1LP0C7T5 689 aaKnown RBP7.1□□□□□ -1.27
SMC4-217ENST00000485867 HMGA1P17096 107 aaKnown RBP7.1□□□□□ -1.27
SMC4-217ENST00000485867 RPL10P27635 214 aaKnown RBP7.1□□□□□ -1.27
SMC4-217ENST00000485867 POLR2BP30876 1174 aaKnown RBP7.1□□□□□ -1.27
SMC4-217ENST00000485867 HSPA4P34932 840 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 GRIK2Q13002 908 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 PLEKHG6Q3KR16 790 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 ZNF568Q3ZCX4 644 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 HSF5Q4G112 596 aaPredicted RBP7.1□□□□□ -1.27
SMC4-217ENST00000485867 SLC36A4Q6YBV0 504 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 USP37Q86T82 979 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 MON1AQ86VX9 555 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 SLC41A1Q8IVJ1 513 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 SFTPA1Q8IWL2 248 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 GALNT15Q8N3T1 639 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 ALLCQ8N6M5 410 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 IL17RCQ8NAC3 791 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 TXNDC5Q8NBS9 432 aaKnown RBP7.1□□□□□ -1.27
SMC4-217ENST00000485867 GIPC2Q8TF65 315 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 BRF1Q92994 677 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 MAP6Q96JE9 813 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 SEPT5Q99719 369 aaPredicted RBP7.1□□□□□ -1.27
SMC4-217ENST00000485867 TCFL5Q9UL49 500 aa7.1□□□□□ -1.27
SMC4-217ENST00000485867 TCRBV21S2A2A0A5A6 115 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 E9PAM4 449 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 ABLIM1O14639 778 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 TADA3O75528 432 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 XRCC6P12956 609 aaKnown RBP eCLIP7.09□□□□□ -1.27
SMC4-217ENST00000485867 CPA1P15085 419 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 TYMPP19971 482 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 ATP2B1P20020 1258 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 LRPAP1P30533 357 aa7.09□□□□□ -1.27
SMC4-217ENST00000485867 EIF2S3P41091 472 aaKnown RBP7.09□□□□□ -1.27
SMC4-217ENST00000485867 KIR2DL1P43626 348 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms