RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 SYT5O00445 386 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 PGRMC2O15173 223 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 PROM1O43490 865 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 LRG1P02750 347 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 ENO2P09104 434 aaPredicted RBP4.74□□□□□ -1.65
RTN4-213ENST00000485749 RSPH10BP0C881 870 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 POLR2MP0CAP2 368 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 PCNAP12004 261 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 PRG2P13727 222 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 BRAFP15056 766 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 VEGFAP15692 232 aaPredicted RBP4.74□□□□□ -1.65
RTN4-213ENST00000485749 IFNAR1P17181 557 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 FGFR4P22455 802 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 JAK1P23458 1154 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 APEX1P27695 318 aaKnown RBP4.74□□□□□ -1.65
RTN4-213ENST00000485749 RFC4P35249 363 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 ARL3P36405 182 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 MAP2K2P36507 400 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 NR2C2P49116 596 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 AMPHP49418 695 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 AP3M2P53677 418 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 ARPC4P59998 168 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 GMFBP60983 142 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 ACTR1AP61163 376 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 VAMP2P63027 116 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 DR1Q01658 176 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 MC1RQ01726 317 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 PLP2Q04941 152 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 GRIN1Q05586 938 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 DMPKQ09013 629 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 ACVR2BQ13705 512 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 BMPR2Q13873 1038 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 PTK2BQ14289 1009 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 PDIA5Q14554 519 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 NOMO1Q15155 1222 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 TARBP2Q15633 366 aaKnown RBP4.74□□□□□ -1.65
RTN4-213ENST00000485749 ZRSR1Q15695 479 aaKnown RBP4.74□□□□□ -1.65
RTN4-213ENST00000485749 HADHQ16836 314 aaKnown RBP4.74□□□□□ -1.65
RTN4-213ENST00000485749 PM20D1Q6GTS8 502 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 ACAD10Q6JQN1 1059 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 WDR93Q6P2C0 686 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 DCLRE1AQ6PJP8 1040 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 UBE3BQ7Z3V4 1068 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 R3HCC1LQ7Z5L2 792 aaKnown RBP4.74□□□□□ -1.65
RTN4-213ENST00000485749 LDHDQ86WU2 507 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 PALM2Q8IXS6 379 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 SCYL3Q8IZE3 742 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 FANCBQ8NB91 859 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 XXYLT1Q8NBI6 393 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 SIMC1Q8NDZ2 872 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 OR2I1PQ8NGU4 316 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 KIF18AQ8NI77 898 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 CYP2W1Q8TAV3 490 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 FEZF2Q8TBJ5 459 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 KBTBD7Q8WVZ9 684 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 TBC1D5Q92609 795 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 PTP4A1Q93096 173 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 SGF29Q96ES7 293 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 CLPTM1LQ96KA5 538 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 MRGPRX4Q96LA9 322 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 HS6ST2Q96MM7 605 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 PWWP2AQ96N64 755 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 DDX50Q9BQ39 737 aaKnown RBP4.74□□□□□ -1.65
RTN4-213ENST00000485749 SIKE1Q9BRV8 207 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 THUMPD3Q9BV44 507 aaKnown RBP4.74□□□□□ -1.65
RTN4-213ENST00000485749 BTBD2Q9BX70 525 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 OSBPL6Q9BZF3 934 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 CARD9Q9H257 536 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 TASP1Q9H6P5 420 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 ARMT1Q9H993 441 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 DDX4Q9NQI0 724 aaKnown RBP4.74□□□□□ -1.65
RTN4-213ENST00000485749 KCND1Q9NSA2 647 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 ZBTB40Q9NUA8 1239 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 ATAD3AQ9NVI7 634 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 UCKL1Q9NWZ5 548 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 AFF4Q9UHB7 1163 aaKnown RBP4.74□□□□□ -1.65
RTN4-213ENST00000485749 FAM153AQ9UHL3 310 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 TSPYL4Q9UJ04 414 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 ZNF215Q9UL58 517 aaPredicted RBP4.74□□□□□ -1.65
RTN4-213ENST00000485749 STK38LQ9Y2H1 464 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 KLHL20Q9Y2M5 609 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 PCDHGA1Q9Y5H4 931 aa4.74□□□□□ -1.65
RTN4-213ENST00000485749 ATP8B3O60423 1300 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 KIF7Q2M1P5 1343 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 TTC41PQ6P2S7 1318 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 RPTORQ8N122 1335 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 RAD50Q92878 1312 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 LOC100653049A0A140TA62 436 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 CLCA1A8K7I4 914 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 F8W8V4 182 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 H0YAE9 185 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 GOLGA8SH3BPF8 625 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 NPC1O15118 1278 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 YKT6O15498 198 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 SULT1B1O43704 296 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 EXTL3O43909 919 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 ERAL1O75616 437 aaKnown RBP4.73□□□□□ -1.65
RTN4-213ENST00000485749 KRT34O76011 436 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 SCGB1D1O95968 90 aa4.73□□□□□ -1.65
RTN4-213ENST00000485749 DLDP09622 509 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms