RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 SLC11A2P49281 568 aa26.75■■□□□ 1.87
HLA-F-227ENST00000485513 TPMTP51580 245 aa26.75■■□□□ 1.87
HLA-F-227ENST00000485513 COPAP53621 1224 aa26.75■■□□□ 1.87
HLA-F-227ENST00000485513 FOXC1Q12948 553 aa26.75■■□□□ 1.87
HLA-F-227ENST00000485513 SEMA3BQ13214 749 aa26.75■■□□□ 1.87
HLA-F-227ENST00000485513 CHST9Q7L1S5 443 aa26.75■■□□□ 1.87
HLA-F-227ENST00000485513 MINDY1Q8N5J2 469 aa26.75■■□□□ 1.87
HLA-F-227ENST00000485513 GPR174Q9BXC1 333 aa26.75■■□□□ 1.87
HLA-F-227ENST00000485513 GGA2Q9UJY4 613 aa26.75■■□□□ 1.87
HLA-F-227ENST00000485513 CACNA1EQ15878 2313 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 MEI4A8MW99 385 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 UPK3BL1B0FP48 263 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 UPK3BL2E5RIL1 263 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 OPHN1O60890 802 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 KRT37O76014 449 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 ACADMP11310 421 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 GNSP15586 552 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 MAOBP27338 520 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 OXTRP30559 389 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 SGSHP51688 502 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 TBX4P57082 545 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 RING1Q06587 406 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 PLEKHG6Q3KR16 790 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 FNDC3BQ53EP0 1204 aaKnown RBP26.74■■□□□ 1.87
HLA-F-227ENST00000485513 RFWD3Q6PCD5 774 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 PIP4P1Q86T03 277 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.74■■□□□ 1.87
HLA-F-227ENST00000485513 IRX2Q9BZI1 471 aaPredicted RBP26.74■■□□□ 1.87
HLA-F-227ENST00000485513 PLA2G4CQ9UP65 541 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 CNTN6Q9UQ52 1028 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 USP24Q9UPU5 2620 aa26.74■■□□□ 1.87
HLA-F-227ENST00000485513 ACSL4O60488 711 aa26.73■■□□□ 1.87
HLA-F-227ENST00000485513 FGFR1OPO95684 399 aaKnown RBP26.73■■□□□ 1.87
HLA-F-227ENST00000485513 PABPC1P11940 636 aaKnown RBP26.73■■□□□ 1.87
HLA-F-227ENST00000485513 KRT5P13647 590 aa26.73■■□□□ 1.87
HLA-F-227ENST00000485513 HLA-EP13747 358 aa26.73■■□□□ 1.87
HLA-F-227ENST00000485513 MPP7Q5T2T1 576 aa26.73■■□□□ 1.87
HLA-F-227ENST00000485513 PIK3R6Q5UE93 754 aa26.73■■□□□ 1.87
HLA-F-227ENST00000485513 KIAA0907Q7Z7F0 614 aaPredicted RBP26.73■■□□□ 1.87
HLA-F-227ENST00000485513 ADIPOR2Q86V24 386 aa26.73■■□□□ 1.87
HLA-F-227ENST00000485513 CACUL1Q86Y37 369 aa26.73■■□□□ 1.87
HLA-F-227ENST00000485513 AHI1Q8N157 1196 aa26.73■■□□□ 1.87
HLA-F-227ENST00000485513 CADM4Q8NFZ8 388 aa26.73■■□□□ 1.87
HLA-F-227ENST00000485513 OR2T3Q8NH03 318 aa26.73■■□□□ 1.87
HLA-F-227ENST00000485513 CYB5D2Q8WUJ1 264 aa26.73■■□□□ 1.87
HLA-F-227ENST00000485513 ST7Q9NRC1 585 aa26.73■■□□□ 1.87
HLA-F-227ENST00000485513 GOLGA6L7A0A1B0GV03 622 aa26.72■■□□□ 1.87
HLA-F-227ENST00000485513 IRAK2O43187 625 aa26.72■■□□□ 1.87
HLA-F-227ENST00000485513 TBL1XO60907 577 aa26.72■■□□□ 1.87
HLA-F-227ENST00000485513 IGLV3-19P01714 112 aa26.72■■□□□ 1.87
HLA-F-227ENST00000485513 GPD2P43304 727 aa26.72■■□□□ 1.87
HLA-F-227ENST00000485513 CAMK2GQ13555 558 aaPredicted RBP26.72■■□□□ 1.87
HLA-F-227ENST00000485513 FAM133BQ5BKY9 247 aaKnown RBP26.72■■□□□ 1.87
HLA-F-227ENST00000485513 SCUBE3Q8IX30 993 aa26.72■■□□□ 1.87
HLA-F-227ENST00000485513 OR2I1PQ8NGU4 316 aa26.72■■□□□ 1.87
HLA-F-227ENST00000485513 DNASE2BQ8WZ79 361 aa26.72■■□□□ 1.87
HLA-F-227ENST00000485513 AZIN2Q96A70 460 aa26.72■■□□□ 1.87
HLA-F-227ENST00000485513 NUP58Q9BVL2 599 aa26.72■■□□□ 1.87
HLA-F-227ENST00000485513 TMEM245Q9H330 911 aa26.72■■□□□ 1.87
HLA-F-227ENST00000485513 UBE2TQ9NPD8 197 aaPredicted RBP26.72■■□□□ 1.87
HLA-F-227ENST00000485513 NFE2L3Q9Y4A8 694 aa26.72■■□□□ 1.87
HLA-F-227ENST00000485513 MUC22E2RYF6 1773 aaPredicted RBP26.71■■□□□ 1.87
HLA-F-227ENST00000485513 SART1O43290 800 aaKnown RBP26.71■■□□□ 1.87
HLA-F-227ENST00000485513 FYNP06241 537 aa26.71■■□□□ 1.87
HLA-F-227ENST00000485513 SLC6A4P31645 630 aa26.71■■□□□ 1.87
HLA-F-227ENST00000485513 RPL34P49207 117 aaKnown RBP26.71■■□□□ 1.87
HLA-F-227ENST00000485513 MBLAC2Q68D91 279 aa26.71■■□□□ 1.87
HLA-F-227ENST00000485513 WFDC5Q8TCV5 224 aa26.71■■□□□ 1.87
HLA-F-227ENST00000485513 DQX1Q8TE96 717 aaKnown RBP26.71■■□□□ 1.87
HLA-F-227ENST00000485513 FAM149B1Q96BN6 582 aa26.71■■□□□ 1.87
HLA-F-227ENST00000485513 SERPINB11Q96P15 392 aa26.71■■□□□ 1.87
HLA-F-227ENST00000485513 DNAAF2Q9NVR5 837 aaKnown RBP26.71■■□□□ 1.87
HLA-F-227ENST00000485513 WASF3Q9UPY6 502 aa26.71■■□□□ 1.87
HLA-F-227ENST00000485513 ATP5BP06576 529 aaKnown RBP26.7■■□□□ 1.86
HLA-F-227ENST00000485513 DLDP09622 509 aaKnown RBP26.7■■□□□ 1.86
HLA-F-227ENST00000485513 ACADSBP45954 432 aa26.7■■□□□ 1.86
HLA-F-227ENST00000485513 DENND1BQ6P3S1 775 aa26.7■■□□□ 1.86
HLA-F-227ENST00000485513 ZNF366Q8N895 744 aa26.7■■□□□ 1.86
HLA-F-227ENST00000485513 ZNF557Q8N988 423 aaPredicted RBP26.7■■□□□ 1.86
HLA-F-227ENST00000485513 FCRL2Q96LA5 508 aaPredicted RBP26.7■■□□□ 1.86
HLA-F-227ENST00000485513 DDX50Q9BQ39 737 aaKnown RBP26.7■■□□□ 1.86
HLA-F-227ENST00000485513 STIM2Q9P246 746 aa26.7■■□□□ 1.86
HLA-F-227ENST00000485513 TLR6Q9Y2C9 796 aa26.7■■□□□ 1.86
HLA-F-227ENST00000485513 FRYQ5TBA9 3013 aa26.69■■□□□ 1.86
HLA-F-227ENST00000485513 A0A1B0GTW7 788 aa26.69■■□□□ 1.86
HLA-F-227ENST00000485513 MED7O43513 233 aa26.69■■□□□ 1.86
HLA-F-227ENST00000485513 LETM1O95202 739 aaPredicted RBP26.69■■□□□ 1.86
HLA-F-227ENST00000485513 POLR2EP19388 210 aaKnown RBP26.69■■□□□ 1.86
HLA-F-227ENST00000485513 CD70P32970 193 aa26.69■■□□□ 1.86
HLA-F-227ENST00000485513 NNTQ13423 1086 aa26.69■■□□□ 1.86
HLA-F-227ENST00000485513 MEA1Q16626 185 aa26.69■■□□□ 1.86
HLA-F-227ENST00000485513 PTPRNQ16849 979 aa26.69■■□□□ 1.86
HLA-F-227ENST00000485513 DCAF12L1Q5VU92 463 aa26.69■■□□□ 1.86
HLA-F-227ENST00000485513 NADSYN1Q6IA69 706 aa26.69■■□□□ 1.86
HLA-F-227ENST00000485513 HJURPQ8NCD3 748 aaPredicted RBP26.69■■□□□ 1.86
HLA-F-227ENST00000485513 STK32AQ8WU08 396 aa26.69■■□□□ 1.86
HLA-F-227ENST00000485513 MIR1-1HGQ9H1L0 117 aa26.69■■□□□ 1.86
HLA-F-227ENST00000485513 LHX5Q9H2C1 402 aa26.69■■□□□ 1.86
HLA-F-227ENST00000485513 NAALADL1Q9UQQ1 740 aa26.69■■□□□ 1.86
HLA-F-227ENST00000485513 TYW5A2RUC4 315 aaKnown RBP26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms