RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 ENGASEQ8NFI3 743 aa13.83□□□□□ -0.2
UBA3-210ENST00000485424 NDRG1Q92597 394 aaKnown RBP13.83□□□□□ -0.2
UBA3-210ENST00000485424 EDEM1Q92611 657 aa13.83□□□□□ -0.2
UBA3-210ENST00000485424 PRCCQ92733 491 aaPredicted RBP13.83□□□□□ -0.2
UBA3-210ENST00000485424 CNGB3Q9NQW8 809 aa13.83□□□□□ -0.2
UBA3-210ENST00000485424 DNAAF2Q9NVR5 837 aaKnown RBP13.83□□□□□ -0.2
UBA3-210ENST00000485424 THAP10Q9P2Z0 257 aaPredicted RBP13.83□□□□□ -0.2
UBA3-210ENST00000485424 SFMBT1Q9UHJ3 866 aa13.83□□□□□ -0.2
UBA3-210ENST00000485424 FBXO10Q9UK96 956 aa13.83□□□□□ -0.2
UBA3-210ENST00000485424 SMG1Q96Q15 3661 aaKnown RBP13.83□□□□□ -0.2
UBA3-210ENST00000485424 TYW5A2RUC4 315 aaKnown RBP13.82□□□□□ -0.2
UBA3-210ENST00000485424 TULP2O00295 520 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 TIMM44O43615 452 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 TSPAN3O60637 253 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 EPHX1P07099 455 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 CD6P30203 668 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 IL12RB1P42701 662 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 RGS7P49802 495 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 ZNF234Q14588 700 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 TRIP4Q15650 581 aaPredicted RBP13.82□□□□□ -0.2
UBA3-210ENST00000485424 PLEKHG6Q3KR16 790 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 FUT11Q495W5 492 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 FNDC3BQ53EP0 1204 aaKnown RBP13.82□□□□□ -0.2
UBA3-210ENST00000485424 CCDC117Q8IWD4 279 aaPredicted RBP13.82□□□□□ -0.2
UBA3-210ENST00000485424 SPATA20Q8TB22 786 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 NELFBQ8WX92 580 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 KCTD13Q8WZ19 329 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 SIPA1Q96FS4 1042 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 ZNF419Q96HQ0 510 aaPredicted RBP13.82□□□□□ -0.2
UBA3-210ENST00000485424 ELOVL2Q9NXB9 296 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 MAN1B1Q9UKM7 699 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 PLA2G4CQ9UP65 541 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 CTNND2Q9UQB3 1225 aa13.82□□□□□ -0.2
UBA3-210ENST00000485424 TDRD6O60522 2096 aaKnown RBP13.82□□□□□ -0.2
UBA3-210ENST00000485424 COL5A1P20908 1838 aaPredicted RBP13.82□□□□□ -0.2
UBA3-210ENST00000485424 KNTC1P50748 2209 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 YJEFN3A6XGL0 299 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 E7ENQ6 273 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 H0Y626 953 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 O00370 1275 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 PIK3R2O00459 728 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 TRIM16O95361 564 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 LATS1O95835 1130 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 GNA14O95837 355 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 HOXB3P14651 431 aaPredicted RBP13.81□□□□□ -0.2
UBA3-210ENST00000485424 OXTRP30559 389 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 SLC11A2P49281 568 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 DAOAP59103 153 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 GRIK2Q13002 908 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 LCLAT1Q6UWP7 414 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 RAB44Q7Z6P3 723 aaPredicted RBP13.81□□□□□ -0.2
UBA3-210ENST00000485424 TMPRSS6Q8IU80 811 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 UNC45BQ8IWX7 931 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 CHCHD4Q8N4Q1 142 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 WFIKKN2Q8TEU8 576 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 TMA16Q96EY4 203 aaKnown RBP13.81□□□□□ -0.2
UBA3-210ENST00000485424 CAMK1GQ96NX5 476 aa13.81□□□□□ -0.2
UBA3-210ENST00000485424 USP36Q9P275 1121 aaKnown RBP13.81□□□□□ -0.2
UBA3-210ENST00000485424 FAM221BA6H8Z2 402 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 P4HA2O15460 535 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 SH3BP5O60239 455 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 FBXO21O94952 628 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 FGFR1OPO95684 399 aaKnown RBP13.8□□□□□ -0.2
UBA3-210ENST00000485424 NCAM1P13591 858 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 BRD2P25440 801 aaKnown RBP13.8□□□□□ -0.2
UBA3-210ENST00000485424 MAOBP27338 520 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 MMRN1Q13201 1228 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 SLC14A1Q13336 389 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 ENPP2Q13822 863 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 HNRNPDQ14103 355 aaKnown RBP13.8□□□□□ -0.2
UBA3-210ENST00000485424 CNGA2Q16280 664 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 ZNF423Q2M1K9 1284 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 ADGRF1Q5T601 910 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 NUGGCQ68CJ6 796 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 CHST9Q7L1S5 443 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 CACUL1Q86Y37 369 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 CREBRFQ8IUR6 639 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 FAM217AQ8IXS0 508 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 ELOA2Q8IYF1 753 aaPredicted RBP13.8□□□□□ -0.2
UBA3-210ENST00000485424 AHI1Q8N157 1196 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 SCML4Q8N228 414 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 ZNF557Q8N988 423 aaPredicted RBP13.8□□□□□ -0.2
UBA3-210ENST00000485424 RBBP8NLQ8NC74 664 aaPredicted RBP13.8□□□□□ -0.2
UBA3-210ENST00000485424 IRGQQ8WZA9 623 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 TOE1Q96GM8 510 aaKnown RBP13.8□□□□□ -0.2
UBA3-210ENST00000485424 PIWIL1Q96J94 861 aaKnown RBP13.8□□□□□ -0.2
UBA3-210ENST00000485424 DDX50Q9BQ39 737 aaKnown RBP13.8□□□□□ -0.2
UBA3-210ENST00000485424 GPR174Q9BXC1 333 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 MKRN2Q9H000 416 aaKnown RBP13.8□□□□□ -0.2
UBA3-210ENST00000485424 MIR1-1HGQ9H1L0 117 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 ST7Q9NRC1 585 aa13.8□□□□□ -0.2
UBA3-210ENST00000485424 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.8□□□□□ -0.2
UBA3-210ENST00000485424 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.8□□□□□ -0.2
UBA3-210ENST00000485424 ARID1BQ8NFD5 2236 aaPredicted RBP13.8□□□□□ -0.2
UBA3-210ENST00000485424 URB1O60287 2271 aaKnown RBP13.79□□□□□ -0.2
UBA3-210ENST00000485424 KCNJ18B7U540 433 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 BIN1O00499 593 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 PMM2O15305 246 aa13.79□□□□□ -0.2
UBA3-210ENST00000485424 MSI1O43347 362 aaKnown RBP13.79□□□□□ -0.2
UBA3-210ENST00000485424 TBL1XO60907 577 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms