RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ARID5AQ03989 594 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 MEA1Q16626 185 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 NUGGCQ68CJ6 796 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 SMYD5Q6GMV2 418 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 UNQ6494/PRO21346Q6UXR6 183 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 BEND5Q7L4P6 421 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 ADIPOR2Q86V24 386 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 AHI1Q8N157 1196 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 ERLEC1Q96DZ1 483 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 ADAM33Q9BZ11 813 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 CIPCQ9C0C6 399 aa11.94□□□□□ -0.5
SCFD1-206ENST00000484733 ASCC3Q8N3C0 2202 aaKnown RBP11.94□□□□□ -0.5
SCFD1-206ENST00000484733 FAM221BA6H8Z2 402 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 TSPAN3O60637 253 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 LTFP02788 710 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 EPHX1P07099 455 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 ACADMP11310 421 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 SLC11A2P49281 568 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 NNTQ13423 1086 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 MORC3Q14149 939 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 PIK3R6Q5UE93 754 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 SERPINA13PQ6UXR4 307 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 CHST9Q7L1S5 443 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 TRIM59Q8IWR1 403 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 GATA6Q92908 595 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 GPR174Q9BXC1 333 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 GGA2Q9UJY4 613 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 TPRP12270 2363 aaKnown RBP11.93□□□□□ -0.5
SCFD1-206ENST00000484733 MEI4A8MW99 385 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 M0QYV0 167 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 ACSL4O60488 711 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 PABPC1P11940 636 aaKnown RBP11.93□□□□□ -0.5
SCFD1-206ENST00000484733 RGS7P49802 495 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 ZBTB16Q05516 673 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 DCAF12L1Q5VU92 463 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 PPM1KQ8N3J5 372 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 NELFBQ8WX92 580 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 SORCS1Q8WY21 1168 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 GOLGA1Q92805 767 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 LMLNQ96KR4 655 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 DDX50Q9BQ39 737 aaKnown RBP11.93□□□□□ -0.5
SCFD1-206ENST00000484733 SCNM1Q9BWG6 230 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 SUN2Q9UH99 717 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 PLA2G4CQ9UP65 541 aa11.93□□□□□ -0.5
SCFD1-206ENST00000484733 C1QTNF9BB2RNN3 333 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 SART1O43290 800 aaKnown RBP11.92□□□□□ -0.5
SCFD1-206ENST00000484733 MSI1O43347 362 aaKnown RBP11.92□□□□□ -0.5
SCFD1-206ENST00000484733 C1QTNF9P0C862 333 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 ZNF883P0CG24 379 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 BMP6P22004 513 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 BRD2P25440 801 aaKnown RBP11.92□□□□□ -0.5
SCFD1-206ENST00000484733 RDXP35241 583 aaKnown RBP11.92□□□□□ -0.5
SCFD1-206ENST00000484733 ACADSBP45954 432 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 TBX4P57082 545 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 PTPRNQ16849 979 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 FAM133BQ5BKY9 247 aaKnown RBP11.92□□□□□ -0.5
SCFD1-206ENST00000484733 ARHGEF19Q8IW93 802 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 C1orf216Q8TAB5 229 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 STK32AQ8WU08 396 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 KAT5Q92993 513 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 TTC17Q96AE7 1141 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 LHX5Q9H2C1 402 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 OSGEPQ9NPF4 335 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 ABCB8Q9NUT2 735 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 TOP3BO95985 862 aaKnown RBP11.92□□□□□ -0.5
SCFD1-206ENST00000484733 ATP5BP06576 529 aaKnown RBP11.92□□□□□ -0.5
SCFD1-206ENST00000484733 DLDP09622 509 aaKnown RBP11.92□□□□□ -0.5
SCFD1-206ENST00000484733 MAOBP27338 520 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 SIM1P81133 766 aaPredicted RBP11.92□□□□□ -0.5
SCFD1-206ENST00000484733 KCNH2Q12809 1159 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 GRIK2Q13002 908 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 ZNF423Q2M1K9 1284 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 FNDC3BQ53EP0 1204 aaKnown RBP11.92□□□□□ -0.5
SCFD1-206ENST00000484733 MBLAC2Q68D91 279 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 ISM2Q6H9L7 571 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 IL27RAQ6UWB1 636 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 KDM1BQ8NB78 822 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 FIBINQ8TAL6 211 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 MSRB2Q9Y3D2 182 aa11.92□□□□□ -0.5
SCFD1-206ENST00000484733 CACNA1BQ00975 2339 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 SPAARA0A1B0GVQ0 90 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 PCNX2A6NKB5 2137 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 TBL1XO60907 577 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 AFPP02771 609 aaKnown RBP11.91□□□□□ -0.5
SCFD1-206ENST00000484733 FYNP06241 537 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 GPD2P43304 727 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 SGSHP51688 502 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 HJURPQ8NCD3 748 aaPredicted RBP11.91□□□□□ -0.5
SCFD1-206ENST00000484733 OR2I1PQ8NGU4 316 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 SLC39A13Q96H72 371 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 FCRL2Q96LA5 508 aaPredicted RBP11.91□□□□□ -0.5
SCFD1-206ENST00000484733 KREMEN1Q96MU8 473 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 SERPINB11Q96P15 392 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 TRIM62Q9BVG3 475 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 PRSS16Q9NQE7 514 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 TLR6Q9Y2C9 796 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 GOLGA6L7A0A1B0GV03 622 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 BCAT2O15382 392 aaPredicted RBP11.91□□□□□ -0.5
SCFD1-206ENST00000484733 ASLP04424 464 aa11.91□□□□□ -0.5
SCFD1-206ENST00000484733 HLA-EP13747 358 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms