RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 FILIP1LQ4L180 1135 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 HSP90AA4PQ58FG1 418 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 DPY19L2P1Q6NXN4 242 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 KIAA1324Q6UXG2 1013 aaKnown RBP10.45□□□□□ -0.74
CPSF4-213ENST00000484112 RAB44Q7Z6P3 723 aaPredicted RBP10.45□□□□□ -0.74
CPSF4-213ENST00000484112 PROSER1Q86XN7 944 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 DHX40Q8IX18 779 aaKnown RBP10.45□□□□□ -0.74
CPSF4-213ENST00000484112 FAM71AQ8IYT1 594 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 SIX6OS1Q8N1H7 587 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 AOPEPQ8N6M6 819 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 ZNF606Q8WXB4 792 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 TFAP2BQ92481 460 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 XPO6Q96QU8 1125 aaKnown RBP10.45□□□□□ -0.74
CPSF4-213ENST00000484112 ERGIC2Q96RQ1 377 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 BBS2Q9BXC9 721 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 NAA15Q9BXJ9 866 aaKnown RBP10.45□□□□□ -0.74
CPSF4-213ENST00000484112 STK33Q9BYT3 514 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 VPS16Q9H269 839 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 LHX5Q9H2C1 402 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 HSD3B7Q9H2F3 369 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 CD93Q9NPY3 652 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 OLA1Q9NTK5 396 aaKnown RBP10.45□□□□□ -0.74
CPSF4-213ENST00000484112 DNAAF2Q9NVR5 837 aaKnown RBP10.45□□□□□ -0.74
CPSF4-213ENST00000484112 PCDHGC3Q9UN70 934 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 TNRC6BQ9UPQ9 1833 aaKnown RBP10.44□□□□□ -0.74
CPSF4-213ENST00000484112 FAM221BA6H8Z2 402 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 PCNX2A6NKB5 2137 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 WASH3PC4AMC7 463 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 M0QYV0 167 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 TLR5O60602 858 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 TBX18O95935 607 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 FTH1P19P0C7X4 201 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 GNSP15586 552 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 GPD2P43304 727 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 TKTL1P51854 596 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 IQCB1Q15051 598 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 ARHGAP44Q17R89 818 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 SYCP2LQ5T4T6 812 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 TOGARAM2Q6ZUX3 1019 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 BEND5Q7L4P6 421 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 APTXQ7Z2E3 356 aaKnown RBP10.44□□□□□ -0.74
CPSF4-213ENST00000484112 GPRIN1Q7Z2K8 1008 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 ZNF677Q86XU0 584 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 BHMTQ93088 406 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 NOX5Q96PH1 765 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 MIR1-1HGQ9H1L0 117 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.44□□□□□ -0.74
CPSF4-213ENST00000484112 CACNA2D2Q9NY47 1150 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 DNMT3LQ9UJW3 386 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 STARD13Q9Y3M8 1113 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 CEP83Q9Y592 693 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 MYH10P35580 1976 aa10.44□□□□□ -0.74
CPSF4-213ENST00000484112 MEI4A8MW99 385 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 PRRT4C9JH25 899 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 F8VZ95 297 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 FOXN3O00409 490 aaPredicted RBP10.43□□□□□ -0.74
CPSF4-213ENST00000484112 CYP26A1O43174 497 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 THAP12O43422 761 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 CCDC172P0C7W6 258 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 RARGP13631 454 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 TYRP14679 529 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 BRD2P25440 801 aaKnown RBP10.43□□□□□ -0.74
CPSF4-213ENST00000484112 USP8P40818 1118 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 PGFP49763 221 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 YWHAGP61981 247 aaKnown RBP eCLIP10.43□□□□□ -0.74
CPSF4-213ENST00000484112 COG7P83436 770 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 UBXN1Q04323 297 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 SLC14A1Q13336 389 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 RAPGEF1Q13905 1077 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 DRAP1Q14919 205 aaPredicted RBP10.43□□□□□ -0.74
CPSF4-213ENST00000484112 COL28A1Q2UY09 1125 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 WDR45BQ5MNZ6 344 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 GJB7Q6PEY0 223 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 PDZD3Q86UT5 571 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 NAXDQ8IW45 347 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 UBA3Q8TBC4 463 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 SETD7Q8WTS6 366 aaKnown RBP10.43□□□□□ -0.74
CPSF4-213ENST00000484112 HNRNPLLQ8WVV9 542 aaKnown RBP10.43□□□□□ -0.74
CPSF4-213ENST00000484112 ADAMTS14Q8WXS8 1223 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 GOLGA1Q92805 767 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 FOXJ1Q92949 421 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 ZNF419Q96HQ0 510 aaPredicted RBP10.43□□□□□ -0.74
CPSF4-213ENST00000484112 MRGPRX1Q96LB2 322 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 ZSWIM1Q9BR11 485 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 ANP32EQ9BTT0 268 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 MIS12Q9H081 205 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 CCDC86Q9H6F5 360 aaKnown RBP10.43□□□□□ -0.74
CPSF4-213ENST00000484112 ABCC13Q9NSE7 274 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 TMEM51Q9NW97 253 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 PLK2Q9NYY3 685 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 WDR35Q9P2L0 1181 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 SUSD2Q9UGT4 822 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 NAGPAQ9UK23 515 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 MYO6Q9UM54 1294 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 ZNF510Q9Y2H8 683 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 SIK3Q9Y2K2 1263 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 GPSM3Q9Y4H4 160 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 PI4KAP42356 2102 aa10.43□□□□□ -0.74
CPSF4-213ENST00000484112 BAHCC1Q9P281 2608 aa10.42□□□□□ -0.74
CPSF4-213ENST00000484112 FRYQ5TBA9 3013 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms