RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 TDP1Q9NUW8 608 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 WNT16Q9UBV4 365 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 TSPAN16Q9UKR8 245 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 FBXL21Q9UKT6 434 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 DUSP12Q9UNI6 340 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 AP4E1Q9UPM8 1137 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 DAAM1Q9Y4D1 1078 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 COL6A3P12111 3177 aa9.38□□□□□ -0.91
COL8A1-207ENST00000483969 FAM92AA1XBS5 289 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 HEPACAM2A8MVW5 462 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 GOLGA6L19H0YKK7 550 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 O00370 1275 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 ZNF263O14978 683 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 XPO1O14980 1071 aaKnown RBP9.37□□□□□ -0.91
COL8A1-207ENST00000483969 SETSIPP0DME0 302 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 PSMC3P17980 439 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 VIPR2P41587 438 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 KIF11P52732 1056 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 ZNF132P52740 706 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 BCAT1P54687 386 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 GPC5P78333 572 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 UBXN1Q04323 297 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 BST2Q10589 180 aaKnown RBP9.37□□□□□ -0.91
COL8A1-207ENST00000483969 ZNF268Q14587 947 aaPredicted RBP9.37□□□□□ -0.91
COL8A1-207ENST00000483969 GOLGA7BQ2TAP0 167 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 TMEM31Q5JXX7 168 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 HECTD3Q5T447 861 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 STXBP5Q5T5C0 1151 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 SNX30Q5VWJ9 437 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 GJB7Q6PEY0 223 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 DHX40Q8IX18 779 aaKnown RBP9.37□□□□□ -0.91
COL8A1-207ENST00000483969 ARHGAP18Q8N392 663 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 FLCNQ8NFG4 579 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 SCAMP5Q8TAC9 235 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 UBA3Q8TBC4 463 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 BPIFB1Q8TDL5 484 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 ASIC4Q96FT7 647 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 LSM14BQ9BX40 385 aaKnown RBP9.37□□□□□ -0.91
COL8A1-207ENST00000483969 STK33Q9BYT3 514 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 PLA2G2FQ9BZM2 168 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 BRD9Q9H8M2 597 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 LRRC4Q9HBW1 653 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 SIX2Q9NPC8 291 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 SLC2A4RGQ9NR83 387 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 TLR8Q9NR97 1041 aaKnown RBP9.37□□□□□ -0.91
COL8A1-207ENST00000483969 RAD18Q9NS91 495 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 TMEM30AQ9NV96 361 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 SCML2Q9UQR0 700 aa9.37□□□□□ -0.91
COL8A1-207ENST00000483969 NCANO14594 1321 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 MYO9BQ13459 2157 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 TMEM221A6NGB7 291 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 LGALS16A8MUM7 142 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 HHLA1C9JL84 531 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 M0R296 226 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 FOXN3O00409 490 aaPredicted RBP9.36□□□□□ -0.91
COL8A1-207ENST00000483969 CHADO15335 359 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 THAP12O43422 761 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 NARSO43776 548 aaKnown RBP9.36□□□□□ -0.91
COL8A1-207ENST00000483969 SERPINC1P01008 464 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 CKMP06732 381 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 CTSBP07858 339 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 RALAP11233 206 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 UCHL3P15374 230 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 FCARP24071 287 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 GNA15P30679 374 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 GDI1P31150 447 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 PDE4CQ08493 712 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 RAPGEF1Q13905 1077 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 IQCB1Q15051 598 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 MEA1Q16626 185 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 SPRED3Q2MJR0 410 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 ARHGAP29Q52LW3 1261 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 CC2D1AQ6P1N0 951 aaPredicted RBP9.36□□□□□ -0.91
COL8A1-207ENST00000483969 VITQ6UXI7 678 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 BMP8AQ7Z5Y6 402 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 TADA2BQ86TJ2 420 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 PIGZQ86VD9 579 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 TTC30AQ86WT1 665 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 ARL14EPQ8N8R7 260 aaPredicted RBP9.36□□□□□ -0.91
COL8A1-207ENST00000483969 ST13P5Q8NFI4 369 aaPredicted RBP9.36□□□□□ -0.91
COL8A1-207ENST00000483969 NEK11Q8NG66 645 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 ZNF606Q8WXB4 792 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 KCTD13Q8WZ19 329 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 TFAP2BQ92481 460 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 SHC3Q92529 594 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 SHDQ96IW2 340 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 HSFY1Q96LI6 401 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 CYP2S1Q96SQ9 504 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 TRIM56Q9BRZ2 755 aaKnown RBP9.36□□□□□ -0.91
COL8A1-207ENST00000483969 NACA2Q9H009 215 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 GSX1Q9H4S2 264 aaPredicted RBP9.36□□□□□ -0.91
COL8A1-207ENST00000483969 CBX8Q9HC52 389 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 TRPV5Q9NQA5 729 aa9.36□□□□□ -0.91
COL8A1-207ENST00000483969 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.36□□□□□ -0.91
COL8A1-207ENST00000483969 MYO7AQ13402 2215 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 C2orf78A6NCI8 922 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 PRR33A8MZF0 331 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 M0QYV0 167 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 TADA3O75528 432 aa9.35□□□□□ -0.91
COL8A1-207ENST00000483969 ZBED1O96006 694 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms