RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 TTC16Q8NEE8 873 aa19.66■□□□□ 0.74
PCCB-216ENST00000483687 SMG9Q9H0W8 520 aaKnown RBP19.66■□□□□ 0.74
PCCB-216ENST00000483687 OSBPL2Q9H1P3 480 aa19.66■□□□□ 0.74
PCCB-216ENST00000483687 L2HGDHQ9H9P8 463 aa19.66■□□□□ 0.74
PCCB-216ENST00000483687 TTC7AQ9ULT0 858 aaPredicted RBP19.66■□□□□ 0.74
PCCB-216ENST00000483687 SNX10Q9Y5X0 201 aa19.66■□□□□ 0.74
PCCB-216ENST00000483687 HS3ST4Q9Y661 456 aa19.66■□□□□ 0.74
PCCB-216ENST00000483687 FAM72CH0Y354 149 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 GOT1P17174 413 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 CORO1AP31146 461 aaKnown RBP19.65■□□□□ 0.74
PCCB-216ENST00000483687 PTPN7P35236 360 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 LTBRP36941 435 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 ZXDBP98169 803 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 CBX2Q14781 532 aaPredicted RBP19.65■□□□□ 0.74
PCCB-216ENST00000483687 ATAT1Q5SQI0 421 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 FAM72AQ5TYM5 149 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 PIK3R6Q5UE93 754 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 FAM72DQ6L9T8 149 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 GPR153Q6NV75 609 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 FAM72BQ86X60 149 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 VSIG1Q86XK7 387 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 SLC13A5Q86YT5 568 aaPredicted RBP19.65■□□□□ 0.74
PCCB-216ENST00000483687 DENND1CQ8IV53 801 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 MYLIPQ8WY64 445 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 NAP1L3Q99457 506 aaPredicted RBP19.65■□□□□ 0.74
PCCB-216ENST00000483687 EPAS1Q99814 870 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 MAK16Q9BXY0 300 aaKnown RBP19.65■□□□□ 0.74
PCCB-216ENST00000483687 S1PR5Q9H228 398 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 CWC15Q9P013 229 aaKnown RBP19.65■□□□□ 0.74
PCCB-216ENST00000483687 PDE2AO00408 941 aaPredicted RBP19.65■□□□□ 0.74
PCCB-216ENST00000483687 EEF2KO00418 725 aaKnown RBP19.65■□□□□ 0.74
PCCB-216ENST00000483687 IL4RP24394 825 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 SLC11A2P49281 568 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 CKAP4Q07065 602 aaKnown RBP19.65■□□□□ 0.74
PCCB-216ENST00000483687 SEMA3BQ13214 749 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 COL19A1Q14993 1142 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 CLUL1Q15846 466 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 TAZQ16635 292 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 ANKRD20A8PQ5CZ79 823 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 MS4A13Q5J8X5 152 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 GET4Q7L5D6 327 aaPredicted RBP19.65■□□□□ 0.74
PCCB-216ENST00000483687 ADAT2Q7Z6V5 191 aaKnown RBP19.65■□□□□ 0.74
PCCB-216ENST00000483687 TSC1Q92574 1164 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 C1orf74Q96LT6 269 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 ZSWIM3Q96MP5 696 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 RCOR3Q9P2K3 495 aaPredicted RBP19.65■□□□□ 0.74
PCCB-216ENST00000483687 ARHGAP26Q9UNA1 814 aa19.65■□□□□ 0.74
PCCB-216ENST00000483687 ZNF487B1APH4 448 aa19.64■□□□□ 0.73
PCCB-216ENST00000483687 H3BRJ5 948 aa19.64■□□□□ 0.73
PCCB-216ENST00000483687 LRIG2O94898 1065 aa19.64■□□□□ 0.73
PCCB-216ENST00000483687 KLKB1P03952 638 aa19.64■□□□□ 0.73
PCCB-216ENST00000483687 ZNF135P52742 658 aaPredicted RBP19.64■□□□□ 0.73
PCCB-216ENST00000483687 MLLT6P55198 1093 aaPredicted RBP19.64■□□□□ 0.73
PCCB-216ENST00000483687 TPI1P60174 286 aa19.64■□□□□ 0.73
PCCB-216ENST00000483687 RFX6Q8HWS3 928 aa19.64■□□□□ 0.73
PCCB-216ENST00000483687 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.64■□□□□ 0.73
PCCB-216ENST00000483687 ADAMTS19Q8TE59 1207 aa19.64■□□□□ 0.73
PCCB-216ENST00000483687 WBP2Q969T9 261 aa19.64■□□□□ 0.73
PCCB-216ENST00000483687 CSPG4P5Q96PW8 444 aa19.64■□□□□ 0.73
PCCB-216ENST00000483687 RNF157Q96PX1 679 aa19.64■□□□□ 0.73
PCCB-216ENST00000483687 CDX2Q99626 313 aaPredicted RBP19.64■□□□□ 0.73
PCCB-216ENST00000483687 HERPUD2Q9BSE4 406 aa19.64■□□□□ 0.73
PCCB-216ENST00000483687 DCLK3Q9C098 648 aa19.64■□□□□ 0.73
PCCB-216ENST00000483687 LSM7Q9UK45 103 aaKnown RBP19.64■□□□□ 0.73
PCCB-216ENST00000483687 EFR3BQ9Y2G0 817 aa19.64■□□□□ 0.73
PCCB-216ENST00000483687 NUP210Q8TEM1 1887 aaPredicted RBP19.64■□□□□ 0.73
PCCB-216ENST00000483687 DAPK3O43293 454 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 ACSL4O60488 711 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 TJP3O95049 919 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 ADCY2Q08462 1091 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 ACBD5Q5T8D3 534 aaPredicted RBP19.63■□□□□ 0.73
PCCB-216ENST00000483687 RAP1GAP2Q684P5 730 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 RFX8Q6ZV50 586 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 DDX42Q86XP3 938 aaKnown RBP eCLIP19.63■□□□□ 0.73
PCCB-216ENST00000483687 NPAS3Q8IXF0 933 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 USP13Q92995 863 aaPredicted RBP19.63■□□□□ 0.73
PCCB-216ENST00000483687 AZIN2Q96A70 460 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 FAF2Q96CS3 445 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 MSLNLQ96KJ4 702 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 RIPOR3Q96MK2 946 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 TDP1Q9NUW8 608 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 CFAP97Q9P2B7 532 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 CCL26Q9Y258 94 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 SH3BP1Q9Y3L3 701 aa19.63■□□□□ 0.73
PCCB-216ENST00000483687 TCRBV7S2A1N4TA0A589 114 aa19.62■□□□□ 0.73
PCCB-216ENST00000483687 LEFTY2O00292 366 aa19.62■□□□□ 0.73
PCCB-216ENST00000483687 CST8O60676 142 aa19.62■□□□□ 0.73
PCCB-216ENST00000483687 DYNLT1P63172 113 aa19.62■□□□□ 0.73
PCCB-216ENST00000483687 AUHQ13825 339 aaKnown RBP19.62■□□□□ 0.73
PCCB-216ENST00000483687 NADSYN1Q6IA69 706 aa19.62■□□□□ 0.73
PCCB-216ENST00000483687 POTEHQ6S545 545 aa19.62■□□□□ 0.73
PCCB-216ENST00000483687 LRRC31Q6UY01 552 aa19.62■□□□□ 0.73
PCCB-216ENST00000483687 CHSY1Q86X52 802 aa19.62■□□□□ 0.73
PCCB-216ENST00000483687 ARID3BQ8IVW6 561 aaPredicted RBP19.62■□□□□ 0.73
PCCB-216ENST00000483687 PCDH19Q8TAB3 1148 aa19.62■□□□□ 0.73
PCCB-216ENST00000483687 ZSCAN18Q8TBC5 510 aaPredicted RBP19.62■□□□□ 0.73
PCCB-216ENST00000483687 SH3RF2Q8TEC5 729 aa19.62■□□□□ 0.73
PCCB-216ENST00000483687 FGF13Q92913 245 aa19.62■□□□□ 0.73
PCCB-216ENST00000483687 AGO1Q9UL18 857 aaKnown RBP19.62■□□□□ 0.73
PCCB-216ENST00000483687 VANGL2Q9ULK5 521 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms