RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 CKBP12277 381 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 IDEP14735 1019 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 UBA1P22314 1058 aaKnown RBP7.12□□□□□ -1.27
CLK1-212ENST00000482590 PEX2P28328 305 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 CCND2P30279 289 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 GPR3P46089 330 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 HSD17B4P51659 736 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 KCNQ1P51787 676 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 CASP5P51878 434 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 ZNF131P52739 623 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 ATXN1P54253 815 aaKnown RBP7.12□□□□□ -1.27
CLK1-212ENST00000482590 RRADP55042 308 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 NAP1L1P55209 391 aaKnown RBP7.12□□□□□ -1.27
CLK1-212ENST00000482590 DEFB103AP81534 67 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 TFF2Q03403 129 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 DUSP8Q13202 625 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 PSMD6Q15008 389 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 ACAP2Q15057 778 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 PGM5Q15124 567 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 PLCB4Q15147 1175 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 TAF12Q16514 161 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 ANO4Q32M45 955 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 RILPL1Q5EBL4 403 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 DNAJC21Q5F1R6 531 aaKnown RBP7.12□□□□□ -1.27
CLK1-212ENST00000482590 RNF220Q5VTB9 566 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 TMCO3Q6UWJ1 677 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 POLNQ7Z5Q5 900 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 LCA5Q86VQ0 697 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 GRAMD1CQ8IYS0 662 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 PPTC7Q8NI37 304 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 GDPD5Q8WTR4 605 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 RUFY2Q8WXA3 655 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 KAT2BQ92831 832 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 SH3KBP1Q96B97 665 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 C1GALT1C1Q96EU7 318 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 CCDC34Q96HJ3 373 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 SPATA33Q96N06 139 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 NT5C1BQ96P26 610 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 MLXIPQ9HAP2 919 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 MRGBPQ9NV56 204 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 NFKBIL1Q9UBC1 381 aaPredicted RBP7.12□□□□□ -1.27
CLK1-212ENST00000482590 MTUS1Q9ULD2 1270 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 PCDHA9Q9Y5H5 950 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 PCDHA1Q9Y5I3 950 aa7.12□□□□□ -1.27
CLK1-212ENST00000482590 PLXNA4Q9HCM2 1894 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.11□□□□□ -1.27
CLK1-212ENST00000482590 C17orf102A2RUQ5 167 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 LCHNA4D1U4 455 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 EPOPA6NHQ4 379 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 F5H0A9 414 aaPredicted RBP7.11□□□□□ -1.27
CLK1-212ENST00000482590 GCOM1H8Y6P7 765 aaPredicted RBP7.11□□□□□ -1.27
CLK1-212ENST00000482590 AQP7O14520 342 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 GJB5O95377 273 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 CXCL10P02778 98 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 POLR2MP0CAP2 368 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 NAT1P18440 290 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 HOXA13P31271 388 aaPredicted RBP7.11□□□□□ -1.27
CLK1-212ENST00000482590 TECP42680 631 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 ADKP55263 362 aaKnown RBP7.11□□□□□ -1.27
CLK1-212ENST00000482590 GHRHRQ02643 423 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 GRM4Q14833 912 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 WTAPQ15007 396 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 ZNF618Q5T7W0 954 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 KRT40Q6A162 431 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 PGBD2Q6P3X8 592 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 CYB5R4Q7L1T6 521 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 TMCO2Q7Z6W1 182 aaPredicted RBP7.11□□□□□ -1.27
CLK1-212ENST00000482590 TMTC1Q8IUR5 882 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 DENND1CQ8IV53 801 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 MYOCDQ8IZQ8 938 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 MIER2Q8N344 545 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 OTUD6BQ8N6M0 293 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 ARL10Q8N8L6 244 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 JADE3Q92613 823 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 TBC1D31Q96DN5 1066 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 CHFRQ96EP1 664 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 TMEM41AQ96HV5 264 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 ZSCAN31Q96LW9 406 aaPredicted RBP7.11□□□□□ -1.27
CLK1-212ENST00000482590 TGS1Q96RS0 853 aaKnown RBP7.11□□□□□ -1.27
CLK1-212ENST00000482590 PIGSQ96S52 555 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 BRD9Q9H8M2 597 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 C11orf21Q9P2W6 132 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 MAD2L2Q9UI95 211 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 PADI4Q9UM07 663 aa7.11□□□□□ -1.27
CLK1-212ENST00000482590 FNDC1Q4ZHG4 1894 aaPredicted RBP7.11□□□□□ -1.27
CLK1-212ENST00000482590 TTC3P53804 2025 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 RSPH10B2B2RC85 870 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 HAS3O00219 553 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 IFIT3O14879 490 aaKnown RBP7.1□□□□□ -1.27
CLK1-212ENST00000482590 ADAMTS3O15072 1205 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 CDC14BO60729 498 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 LGALS2P05162 132 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 RSPH10BP0C881 870 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 THPOP40225 353 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 STAT1P42224 750 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 ETV4P43268 484 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 COPAP53621 1224 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 SCAND1P57086 179 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 SEC23AQ15436 765 aa7.1□□□□□ -1.27
CLK1-212ENST00000482590 CLUL1Q15846 466 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms