RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 FAM200BP0CF97 657 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 STAG3L1P0CL83 205 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 ARL1P40616 181 aaPredicted RBP13.06□□□□□ -0.32
VPS52-218ENST00000482399 ZNF143P52747 638 aaPredicted RBP13.06□□□□□ -0.32
VPS52-218ENST00000482399 TTLL12Q14166 644 aaPredicted RBP13.06□□□□□ -0.32
VPS52-218ENST00000482399 CES4AQ5XG92 561 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 ADGRF2Q8IZF7 708 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 TDRD5Q8NAT2 981 aaKnown RBP13.06□□□□□ -0.32
VPS52-218ENST00000482399 FAM81AQ8TBF8 368 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 MZB1Q8WU39 189 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 DCUN1D5Q9BTE7 237 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 SUDS3Q9H7L9 328 aaPredicted RBP13.06□□□□□ -0.32
VPS52-218ENST00000482399 MYOZ2Q9NPC6 264 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 TCF7L2Q9NQB0 619 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 AP4E1Q9UPM8 1137 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 LZTS1Q9Y250 596 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 SDR42E2A6NKP2 422 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 MAFGO15525 162 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 PAPSS1O43252 624 aaPredicted RBP13.06□□□□□ -0.32
VPS52-218ENST00000482399 VTNP04004 478 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 COX4I1P13073 169 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 ASPAP45381 313 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 RAP1GDS1P52306 607 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 NME5P56597 212 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 INHBEP58166 350 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 CXCL9Q07325 125 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 KCNJ11Q14654 390 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 SURF1Q15526 300 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 DCAF6Q58WW2 860 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 LRRC43Q8N309 656 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 BHLHE22Q8NFJ8 381 aaPredicted RBP13.06□□□□□ -0.32
VPS52-218ENST00000482399 SEPT1Q8WYJ6 367 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 CCT7Q99832 543 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 NT5C1AQ9BXI3 368 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 SDCBP2Q9H190 292 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 PCDH18Q9HCL0 1135 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 CYP4F12Q9HCS2 524 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 ARHGEF4Q9NR80 690 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 TRPC5Q9UL62 973 aaPredicted RBP13.06□□□□□ -0.32
VPS52-218ENST00000482399 ANKRD12Q6UB98 2062 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 ITGA2BP08514 1039 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 GOT1P17174 413 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 UBA1P22314 1058 aaKnown RBP13.06□□□□□ -0.32
VPS52-218ENST00000482399 PSMB4P28070 264 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 IDH3AP50213 366 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 AP3M2P53677 418 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 MAPK10P53779 464 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 NAGLUP54802 743 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 WASHC5Q12768 1159 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 MPZL3Q6UWV2 235 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 MYLK4Q86YV6 388 aaPredicted RBP13.06□□□□□ -0.32
VPS52-218ENST00000482399 APLFQ8IW19 511 aaPredicted RBP13.06□□□□□ -0.32
VPS52-218ENST00000482399 ZNF280CQ8ND82 737 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 CLEC4CQ8WTT0 213 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 COPS5Q92905 334 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 RCN3Q96D15 328 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 SPATA33Q96N06 139 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 LIN28AQ9H9Z2 209 aaKnown RBP13.06□□□□□ -0.32
VPS52-218ENST00000482399 SNX13Q9Y5W8 968 aa13.06□□□□□ -0.32
VPS52-218ENST00000482399 KLHL33A6NCF5 533 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 C3orf70A6NLC5 250 aaPredicted RBP13.05□□□□□ -0.32
VPS52-218ENST00000482399 SPATA31D3P0C874 917 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 GALK1P51570 392 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 ABCE1P61221 599 aaKnown RBP13.05□□□□□ -0.32
VPS52-218ENST00000482399 C11orf91Q3C1V1 193 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 GJC2Q5T442 439 aaPredicted RBP13.05□□□□□ -0.32
VPS52-218ENST00000482399 SPATA31D4Q6ZUB0 917 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 C1orf127Q8N9H9 656 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 SLC4A11Q8NBS3 891 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 CMASQ8NFW8 434 aaPredicted RBP13.05□□□□□ -0.32
VPS52-218ENST00000482399 ACO2Q99798 780 aaKnown RBP13.05□□□□□ -0.32
VPS52-218ENST00000482399 OMDQ99983 421 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 TMPRSS4Q9NRS4 437 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 A0A096LPK6 155 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 E7ESA3 106 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 BACE1P56817 501 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 TMEM132DQ14C87 1099 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 SLC9B1Q4ZJI4 515 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 PACS1Q6VY07 963 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 ACAD11Q709F0 780 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 OR52K1Q8NGK4 314 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 TFB1MQ8WVM0 346 aaKnown RBP13.05□□□□□ -0.32
VPS52-218ENST00000482399 DCUN1D1Q96GG9 259 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 CCDC106Q9BWC9 280 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 DHX33Q9H6R0 707 aaKnown RBP13.05□□□□□ -0.32
VPS52-218ENST00000482399 NRDE2Q9H7Z3 1164 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 AURKCQ9UQB9 309 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 AP4B1Q9Y6B7 739 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 A0A087WZ62 844 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 HCRTO43612 131 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 CHRNGP07510 517 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 DHRS4L1P0CG22 281 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 MPSTP25325 297 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 ABCD1P33897 745 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 CRHR1P34998 444 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 PLK1P53350 603 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 HDAC4P56524 1084 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 SEPT6Q14141 434 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 GK3PQ14409 553 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 USP10Q14694 798 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms