RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 MPP7Q5T2T1 576 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 PIK3R6Q5UE93 754 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 TMEM215Q68D42 235 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 GJB7Q6PEY0 223 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 CHST9Q7L1S5 443 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 ENOSF1Q7L5Y1 443 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 SCUBE3Q8IX30 993 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 AHI1Q8N157 1196 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 CADM4Q8NFZ8 388 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 SORCS1Q8WY21 1168 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 TOE1Q96GM8 510 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 TRIM62Q9BVG3 475 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 NUP58Q9BVL2 599 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 GPR174Q9BXC1 333 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 INTS2Q9H0H0 1204 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 CAPN10Q9HC96 672 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 ACP6Q9NPH0 428 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 USP36Q9P275 1121 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 CNTN6Q9UQ52 1028 aa13.99□□□□□ -0.17
CTDSP1-208ENST00000482272 PCDH15Q96QU1 1955 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 TYW5A2RUC4 315 aaKnown RBP13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 CAPN9O14815 690 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 TBL1XO60907 577 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 IGLV3-27P01718 113 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 PABPC1P11940 636 aaKnown RBP13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 RPL34P49207 117 aaKnown RBP13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 TPMTP51580 245 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 COPAP53621 1224 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 ZNF252P-AS1Q0IIN9 211 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 PLEKHG6Q3KR16 790 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 FNDC3BQ53EP0 1204 aaKnown RBP13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 KIAA0907Q7Z7F0 614 aaPredicted RBP13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 IRF2BP1Q8IU81 584 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 CCDC117Q8IWD4 279 aaPredicted RBP13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 DEFB124Q8NES8 71 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 OR2T3Q8NH03 318 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 STK32AQ8WU08 396 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 ZNF606Q8WXB4 792 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 FAM149B1Q96BN6 582 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 MYEOVQ96EZ4 313 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 SERPINB11Q96P15 392 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 ABCB8Q9NUT2 735 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 KIAA1468Q9P260 1216 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 SUN2Q9UH99 717 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 CYTH4Q9UIA0 394 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 RWDD2AQ9UIY3 292 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 GGA2Q9UJY4 613 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 AJAP1Q9UKB5 411 aaPredicted RBP13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 TLR6Q9Y2C9 796 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 NFE2L3Q9Y4A8 694 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 CKAP5Q14008 2032 aa13.98□□□□□ -0.17
CTDSP1-208ENST00000482272 GOLGA6L7A0A1B0GV03 622 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 MEI4A8MW99 385 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 UPK3BL1B0FP48 263 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 KCNJ18B7U540 433 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 UPK3BL2E5RIL1 263 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 LETM1O95202 739 aaPredicted RBP13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 FYNP06241 537 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 POLR2EP19388 210 aaKnown RBP13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 PRKCHP24723 683 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 MAOBP27338 520 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 UBE2HP62256 183 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 FOXC1Q12948 553 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 SEMA3BQ13214 749 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 MEA1Q16626 185 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 ST3GAL2Q16842 350 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 MBLAC2Q68D91 279 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 RFWD3Q6PCD5 774 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 BEND5Q7L4P6 421 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 ADIPOR2Q86V24 386 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 MINDY1Q8N5J2 469 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 WFDC5Q8TCV5 224 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 CYB5D2Q8WUJ1 264 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 TMEM245Q9H330 911 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 FSCN3Q9NQT6 498 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 NAALADL1Q9UQQ1 740 aa13.97□□□□□ -0.17
CTDSP1-208ENST00000482272 A0A1B0GTW7 788 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 METTL12A8MUP2 240 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 THAP12O43422 761 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 IGLV3-19P01714 112 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 DLDP09622 509 aaKnown RBP13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 HLA-EP13747 358 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 GNA15P30679 374 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 SLC6A4P31645 630 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 RDXP35241 583 aaKnown RBP13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 NNTQ13423 1086 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 CAMK2GQ13555 558 aaPredicted RBP13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 HNRNPDQ14103 355 aaKnown RBP13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 FAM133BQ5BKY9 247 aaKnown RBP13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 DCAF12L1Q5VU92 463 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 DENND1BQ6P3S1 775 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 GBP6Q6ZN66 633 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 MFN1Q8IWA4 741 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 HJURPQ8NCD3 748 aaPredicted RBP13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 FIBINQ8TAL6 211 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 DQX1Q8TE96 717 aaKnown RBP13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 DNASE2BQ8WZ79 361 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 SLC4A5Q9BY07 1137 aa13.96□□□□□ -0.17
CTDSP1-208ENST00000482272 ZDHHC5Q9C0B5 715 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms