RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 THAP10Q9P2Z0 257 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-213ENST00000482192 INVSQ9Y283 1065 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 SIK3Q9Y2K2 1263 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 STON1Q9Y6Q2 735 aa12.34□□□□□ -0.43
HMGN1-213ENST00000482192 PRR5-ARHGAP8B1AHC4 643 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 EPHB6O15197 1021 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 TBL1XO60907 577 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 DAB1O75553 588 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 GRAP2O75791 330 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 GFPT2O94808 682 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 MOCS2O96007 188 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-213ENST00000482192 CCR1P32246 355 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 SOX5P35711 763 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 P2RY2P41231 377 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 ID4P47928 161 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 SGSHP51688 502 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 JAM2P57087 298 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 ARHGAP8P85298 464 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 UBXN1Q04323 297 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 MTA1Q13330 715 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 EIF4EBP2Q13542 120 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-213ENST00000482192 ENPP2Q13822 863 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 ZC3H12AQ5D1E8 599 aaKnown RBP12.33□□□□□ -0.44
HMGN1-213ENST00000482192 MS4A13Q5J8X5 152 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 PMS2CLQ68D20 193 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 RNF43Q68DV7 783 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 KIAA1211LQ6NV74 962 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 ERICH1Q86X53 443 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 ZNF677Q86XU0 584 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 MFN1Q8IWA4 741 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 AHI1Q8N157 1196 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.33□□□□□ -0.44
HMGN1-213ENST00000482192 NEK11Q8NG66 645 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 BTN2A3PQ96KV6 586 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 PRICKLE1Q96MT3 831 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-213ENST00000482192 SPAG5Q96R06 1193 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 HSD3B7Q9H2F3 369 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 ARRDC1-AS1Q9H2J1 176 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 CD248Q9HCU0 757 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 NLRC4Q9NPP4 1024 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 ABCB8Q9NUT2 735 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 DDIT4Q9NX09 232 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 CALCOCO1Q9P1Z2 691 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 SLC12A6Q9UHW9 1150 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 GGA2Q9UJY4 613 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 RAD54BQ9Y620 910 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 MYOFQ9NZM1 2061 aa12.33□□□□□ -0.44
HMGN1-213ENST00000482192 OTOGLQ3ZCN5 2332 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 KCNU1A8MYU2 1149 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 WASH3PC4AMC7 463 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 MAP3K13O43283 966 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 MMEP08473 750 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 PABPC1P11940 636 aaKnown RBP12.32□□□□□ -0.44
HMGN1-213ENST00000482192 NDUFV2P19404 249 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 ABCB4P21439 1286 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 SDHBP21912 280 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 BCKDHBP21953 392 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 NOS2P35228 1153 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 SCNN1AP37088 669 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 MPLP40238 635 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 STAT1P42224 750 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 MATKP42679 507 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 IL12RB1P42701 662 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 GABRB2P47870 512 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 PITX1P78337 314 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-213ENST00000482192 CDR2Q01850 454 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 CDH18Q13634 790 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 ZNF234Q14588 700 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 MAP7D1Q3KQU3 841 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 TMEM215Q68D42 235 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 SERPINA13PQ6UXR4 307 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 PRR23CQ6ZRP0 262 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 APTXQ7Z2E3 356 aaKnown RBP12.32□□□□□ -0.44
HMGN1-213ENST00000482192 KIAA0907Q7Z7F0 614 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-213ENST00000482192 ADIPOR2Q86V24 386 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 CCDC117Q8IWD4 279 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-213ENST00000482192 ATP6V0D2Q8N8Y2 350 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 RLN3Q8WXF3 142 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 RNF34Q969K3 372 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 RMDN1Q96DB5 314 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 C18orf8Q96DM3 657 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 ERGIC2Q96RQ1 377 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 NUCKS1Q9H1E3 243 aaKnown RBP12.32□□□□□ -0.44
HMGN1-213ENST00000482192 RRN3Q9NYV6 651 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 STIM2Q9P246 746 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 XPO7Q9UIA9 1087 aaKnown RBP12.32□□□□□ -0.44
HMGN1-213ENST00000482192 NOCTQ9UK39 431 aaKnown RBP12.32□□□□□ -0.44
HMGN1-213ENST00000482192 STAP1Q9ULZ2 295 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 PLA2G4CQ9UP65 541 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 DMDP11532 3685 aa12.32□□□□□ -0.44
HMGN1-213ENST00000482192 SYNJ2BP-COX16A0A087WUM0 186 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 SMTNL1A8MU46 457 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 F5H5T6 163 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 SYNCRIPO60506 623 aaKnown RBP12.31□□□□□ -0.44
HMGN1-213ENST00000482192 ZNF217O75362 1048 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 ATP5BP06576 529 aaKnown RBP12.31□□□□□ -0.44
HMGN1-213ENST00000482192 ATP1A3P13637 1013 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 TACR2P21452 398 aa12.31□□□□□ -0.44
HMGN1-213ENST00000482192 RPS24P62847 133 aaKnown RBP12.31□□□□□ -0.44
HMGN1-213ENST00000482192 NOMO3P69849 1222 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms