RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 PLD1Q13393 1074 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 KCTD19Q17RG1 926 aaPredicted RBP10.81□□□□□ -0.68
LINC00173-203ENST00000480237 MSS51Q4VC12 460 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 BRMS1LQ5PSV4 323 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 DRICH1Q6PGQ1 229 aaPredicted RBP10.81□□□□□ -0.68
LINC00173-203ENST00000480237 C1orf228Q6PIY5 440 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 SYDE1Q6ZW31 735 aaPredicted RBP10.81□□□□□ -0.68
LINC00173-203ENST00000480237 TMC7Q7Z402 723 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 DDX42Q86XP3 938 aaKnown RBP eCLIP10.81□□□□□ -0.68
LINC00173-203ENST00000480237 PDZD8Q8NEN9 1154 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 ATL2Q8NHH9 583 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 PCDH19Q8TAB3 1148 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 P3H4Q92791 437 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 SLCO2A1Q92959 643 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 FAF2Q96CS3 445 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 CSPG4P5Q96PW8 444 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 ERP44Q9BS26 406 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 TTLL2Q9BWV7 592 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 TKTL2Q9H0I9 626 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 MTMR10Q9NXD2 777 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 FBXW11Q9UKB1 542 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 NFU1Q9UMS0 254 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 INSL5Q9Y5Q6 135 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 DENND4AQ7Z401 1863 aa10.81□□□□□ -0.68
LINC00173-203ENST00000480237 LINC01553A4QN01 128 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 SGK1O00141 431 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 TEX28O15482 410 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 DAPK3O43293 454 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 LPXNO60711 386 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 ADH1AP07327 375 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 CCR1P32246 355 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 CARSP49589 748 aaKnown RBP10.8□□□□□ -0.68
LINC00173-203ENST00000480237 EIF3EP60228 445 aaKnown RBP10.8□□□□□ -0.68
LINC00173-203ENST00000480237 PTK6Q13882 451 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 NOMO1Q15155 1222 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 C10orf120Q5SQS8 335 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 PLPP4Q5VZY2 271 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 SLC9A4Q6AI14 798 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 NPNTQ6UXI9 565 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 CCNI2Q6ZMN8 369 aaPredicted RBP10.8□□□□□ -0.68
LINC00173-203ENST00000480237 HNRNPLLQ8WVV9 542 aaKnown RBP10.8□□□□□ -0.68
LINC00173-203ENST00000480237 NKD2Q969F2 451 aaPredicted RBP10.8□□□□□ -0.68
LINC00173-203ENST00000480237 ABHD8Q96I13 439 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 ZNF512Q96ME7 567 aaPredicted RBP10.8□□□□□ -0.68
LINC00173-203ENST00000480237 TCF25Q9BQ70 676 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 MAGEB5Q9BZ81 275 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 ALG13Q9NP73 1137 aaKnown RBP10.8□□□□□ -0.68
LINC00173-203ENST00000480237 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.8□□□□□ -0.68
LINC00173-203ENST00000480237 OSER1Q9NX31 292 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 CLIC5Q9NZA1 410 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 CWC15Q9P013 229 aaKnown RBP10.8□□□□□ -0.68
LINC00173-203ENST00000480237 SAE1Q9UBE0 346 aaPredicted RBP10.8□□□□□ -0.68
LINC00173-203ENST00000480237 HEY1Q9Y5J3 304 aa10.8□□□□□ -0.68
LINC00173-203ENST00000480237 CCDC85CA6NKD9 419 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 H7C0C1 242 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 CXCL14O95715 111 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 MOCS2O96007 188 aaPredicted RBP10.79□□□□□ -0.68
LINC00173-203ENST00000480237 KRT14P02533 472 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 APOEP02649 317 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 ITGAVP06756 1048 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 CNPP09543 421 aaKnown RBP10.79□□□□□ -0.68
LINC00173-203ENST00000480237 AMPD1P23109 780 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 IL4RP24394 825 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 BMPR1AP36894 532 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 RPL21P46778 160 aaKnown RBP10.79□□□□□ -0.68
LINC00173-203ENST00000480237 ATP5OP48047 213 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 VPS41P49754 854 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 ZNF135P52742 658 aaPredicted RBP10.79□□□□□ -0.68
LINC00173-203ENST00000480237 EPHB3P54753 998 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 TWF1Q12792 350 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 PPP2R5DQ14738 602 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 OASLQ15646 514 aaKnown RBP10.79□□□□□ -0.68
LINC00173-203ENST00000480237 C9orf50Q5SZB4 431 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 RASIP1Q5U651 963 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 DUPD1Q68J44 220 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 TADA2BQ86TJ2 420 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 ZC3H18Q86VM9 953 aaKnown RBP10.79□□□□□ -0.68
LINC00173-203ENST00000480237 TCEAL8Q8IYN2 117 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 ALLCQ8N6M5 410 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 PQLC3Q8N755 202 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 PLD5Q8N7P1 536 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 SLC35B2Q8TB61 432 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 AENQ8WTP8 325 aaKnown RBP10.79□□□□□ -0.68
LINC00173-203ENST00000480237 OVCA2Q8WZ82 227 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 SNF8Q96H20 258 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 CDK5RAP1Q96SZ6 601 aaKnown RBP10.79□□□□□ -0.68
LINC00173-203ENST00000480237 C17orf80Q9BSJ5 609 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 EMILIN2Q9BXX0 1053 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 UBE2OQ9C0C9 1292 aaKnown RBP10.79□□□□□ -0.68
LINC00173-203ENST00000480237 NACA2Q9H009 215 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 RXFP1Q9HBX9 757 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 ANLNQ9NQW6 1124 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 ARHGEF4Q9NR80 690 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 TLR9Q9NR96 1032 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 TMEM51Q9NW97 253 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 MARCH2Q9P0N8 246 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 MAFFQ9ULX9 164 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 LZTS1Q9Y250 596 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 TLR6Q9Y2C9 796 aa10.79□□□□□ -0.68
LINC00173-203ENST00000480237 SNX24Q9Y343 169 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms