RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 FAM133BQ5BKY9 247 aaKnown RBP11.23□□□□□ -0.61
ATG4B-219ENST00000479941 MPP7Q5T2T1 576 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 ACBD5Q5T8D3 534 aaPredicted RBP11.23□□□□□ -0.61
ATG4B-219ENST00000479941 PIK3R6Q5UE93 754 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 NUDT18Q6ZVK8 323 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.23□□□□□ -0.61
ATG4B-219ENST00000479941 NAT16Q8N8M0 369 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 TMEM105Q8N8V8 129 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 CENPIQ92674 756 aaPredicted RBP11.23□□□□□ -0.61
ATG4B-219ENST00000479941 TMA16Q96EY4 203 aaKnown RBP11.23□□□□□ -0.61
ATG4B-219ENST00000479941 MCEEQ96PE7 176 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 CHP1Q99653 195 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 ADAM33Q9BZ11 813 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 TKTL2Q9H0I9 626 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 NHEJ1Q9H9Q4 299 aaPredicted RBP11.23□□□□□ -0.61
ATG4B-219ENST00000479941 LMAN1LQ9HAT1 526 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 ARHGEF38Q9NXL2 777 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 DLGAP2Q9P1A6 1054 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 CALCOCO1Q9P1Z2 691 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 FBXO10Q9UK96 956 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 NENFQ9UMX5 172 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 COL4A3Q01955 1670 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 GOLGA6L7A0A1B0GV03 622 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 ATMINO43313 823 aaPredicted RBP11.22□□□□□ -0.61
ATG4B-219ENST00000479941 TSPAN3O60637 253 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 KAT7O95251 611 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 APODP05090 189 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 DCNP07585 359 aaKnown RBP11.22□□□□□ -0.61
ATG4B-219ENST00000479941 TACR2P21452 398 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 SLC6A4P31645 630 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 GRIA2P42262 883 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 SLC6A11P48066 632 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 RPL7AP62424 266 aaKnown RBP11.22□□□□□ -0.61
ATG4B-219ENST00000479941 CDO1Q16878 200 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 C15orf59Q2T9L4 293 aaPredicted RBP11.22□□□□□ -0.61
ATG4B-219ENST00000479941 MS4A13Q5J8X5 152 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 NAIF1Q69YI7 327 aaPredicted RBP11.22□□□□□ -0.61
ATG4B-219ENST00000479941 NADSYN1Q6IA69 706 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 GRAMD4Q6IC98 578 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 FSTL4Q6MZW2 842 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 RFWD3Q6PCD5 774 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 C12orf40Q86WS4 652 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 DNAAF5Q86Y56 855 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 ZNF557Q8N988 423 aaPredicted RBP11.22□□□□□ -0.61
ATG4B-219ENST00000479941 HJURPQ8NCD3 748 aaPredicted RBP11.22□□□□□ -0.61
ATG4B-219ENST00000479941 FNIP1Q8TF40 1166 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 FAM172AQ8WUF8 416 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 BHMTQ93088 406 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 PANX2Q96RD6 677 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 CNPY3Q9BT09 278 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 IER2Q9BTL4 223 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 SLC2A11Q9BYW1 496 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 FBRSL1Q9HCM7 1045 aaKnown RBP11.22□□□□□ -0.61
ATG4B-219ENST00000479941 ARHGEF4Q9NR80 690 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 DNAJC17Q9NVM6 304 aaKnown RBP11.22□□□□□ -0.61
ATG4B-219ENST00000479941 PLK2Q9NYY3 685 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 MYOFQ9NZM1 2061 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 IMPACTQ9P2X3 320 aa11.22□□□□□ -0.61
ATG4B-219ENST00000479941 XPO7Q9UIA9 1087 aaKnown RBP11.22□□□□□ -0.61
ATG4B-219ENST00000479941 ZNF318Q5VUA4 2279 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 TMEM191CA6NGB0 347 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 GOLGA6L6A8MZA4 724 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 F5H5T6 163 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 CCP110O43303 1012 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 PAGE1O75459 146 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 EGFP01133 1207 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 HOXD9P28356 352 aaPredicted RBP11.21□□□□□ -0.61
ATG4B-219ENST00000479941 TNFRSF4P43489 277 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 DGKGP49619 791 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 ATXN1P54253 815 aaKnown RBP11.21□□□□□ -0.61
ATG4B-219ENST00000479941 GALCP54803 685 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 ARL13BQ3SXY8 428 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 RABGAP1LQ5R372 815 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 RAP1GAP2Q684P5 730 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 RNF43Q68DV7 783 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 CHSY1Q86X52 802 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 FAM131BQ86XD5 332 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 CCDC117Q8IWD4 279 aaPredicted RBP11.21□□□□□ -0.61
ATG4B-219ENST00000479941 CCDC170Q8IYT3 715 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 PHTF2Q8N3S3 785 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 TERB1Q8NA31 727 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 P2RY11Q96G91 374 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 C1orf74Q96LT6 269 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 HAPLN3Q96S86 360 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 PRRX2Q99811 253 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 PRMT1Q99873 361 aaKnown RBP11.21□□□□□ -0.61
ATG4B-219ENST00000479941 THAP2Q9H0W7 228 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 CHRDQ9H2X0 955 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 RBM12Q9NTZ6 932 aaKnown RBP11.21□□□□□ -0.61
ATG4B-219ENST00000479941 MYO1AQ9UBC5 1043 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 SLC27A6Q9Y2P4 619 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 HS3ST4Q9Y661 456 aa11.21□□□□□ -0.61
ATG4B-219ENST00000479941 MIA3Q5JRA6 1907 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 TBC1D3BA6NDS4 549 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 K7EQS6 105 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 TBL1XO60907 577 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 ATG13O75143 517 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 CYP1A2P05177 515 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 H2AFZP0C0S5 128 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 CISD3P0C7P0 127 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms