RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 CCDC157Q569K6 752 aa16.34■□□□□ 0.21
HDLBP-238ENST00000479894 TCP11X2Q5H9J9 407 aa16.34■□□□□ 0.21
HDLBP-238ENST00000479894 TRAPPC11Q7Z392 1133 aa16.34■□□□□ 0.21
HDLBP-238ENST00000479894 AOPEPQ8N6M6 819 aa16.34■□□□□ 0.21
HDLBP-238ENST00000479894 EEF2KMTQ96G04 330 aa16.34■□□□□ 0.21
HDLBP-238ENST00000479894 FAXDC2Q96IV6 333 aa16.34■□□□□ 0.21
HDLBP-238ENST00000479894 BBS2Q9BXC9 721 aa16.34■□□□□ 0.21
HDLBP-238ENST00000479894 MKRN2Q9H000 416 aaKnown RBP16.34■□□□□ 0.21
HDLBP-238ENST00000479894 FANCLQ9NW38 375 aa16.34■□□□□ 0.21
HDLBP-238ENST00000479894 DNMT3LQ9UJW3 386 aa16.34■□□□□ 0.21
HDLBP-238ENST00000479894 ANKRD6Q9Y2G4 727 aa16.34■□□□□ 0.21
HDLBP-238ENST00000479894 ARID1BQ8NFD5 2236 aaPredicted RBP16.33■□□□□ 0.2
HDLBP-238ENST00000479894 B8ZZF3 427 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 WASH3PC4AMC7 463 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 AFPP02771 609 aaKnown RBP16.33■□□□□ 0.2
HDLBP-238ENST00000479894 KRT19P08727 400 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 CISD3P0C7P0 127 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 DGKGP49619 791 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 MXI1P50539 228 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 E2F5Q15329 346 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 SGSM1Q2NKQ1 1148 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 ZACNQ401N2 412 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 CDKAL1Q5VV42 579 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 HTR3DQ70Z44 454 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 NUP93Q8N1F7 819 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 PRCCQ92733 491 aaPredicted RBP16.33■□□□□ 0.2
HDLBP-238ENST00000479894 FBXO32Q969P5 355 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 SLC35C1Q96A29 364 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 SIPA1Q96FS4 1042 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 TMEM176AQ96HP8 235 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 FAM81BQ96LP2 452 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 TUBGCP2Q9BSJ2 902 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 MTMR12Q9C0I1 747 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 ELOVL4Q9GZR5 314 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.33■□□□□ 0.2
HDLBP-238ENST00000479894 SIX4Q9UIU6 781 aa16.33■□□□□ 0.2
HDLBP-238ENST00000479894 RFPL3O75679 317 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 STAU1O95793 577 aaKnown RBP16.32■□□□□ 0.2
HDLBP-238ENST00000479894 TPM3P06753 285 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 FAM163BP0C2L3 166 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 CXADRP78310 365 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 PKDCCQ504Y2 493 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 FKBP15Q5T1M5 1219 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 SCARA3Q6AZY7 606 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 SMYD5Q6GMV2 418 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 SV2AQ7L0J3 742 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 TMPRSS6Q8IU80 811 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 CACTIN-AS1Q8N1I8 211 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 FBXL13Q8NEE6 735 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 MED15Q96RN5 788 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 CBX8Q9HC52 389 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 PIEZO2Q9H5I5 2752 aa16.32■□□□□ 0.2
HDLBP-238ENST00000479894 GTPBP10A4D1E9 387 aaKnown RBP16.31■□□□□ 0.2
HDLBP-238ENST00000479894 LRRC10BA6NIK2 292 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 ENC1O14682 589 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 CLSTN1O94985 981 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 WISP1O95388 367 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 C4BPAP04003 597 aaKnown RBP16.31■□□□□ 0.2
HDLBP-238ENST00000479894 PDGFRBP09619 1106 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 ACADMP11310 421 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 TRIM21P19474 475 aaKnown RBP16.31■□□□□ 0.2
HDLBP-238ENST00000479894 ACTN2P35609 894 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 IL12RB1P42701 662 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 GCLMP48507 274 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 FMO5P49326 533 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 KCNH2Q12809 1159 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 IFRD2Q12894 506 aaPredicted RBP16.31■□□□□ 0.2
HDLBP-238ENST00000479894 TARDBPQ13148 414 aaKnown RBP eCLIP16.31■□□□□ 0.2
HDLBP-238ENST00000479894 NCOA4Q13772 614 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 IQCB1Q15051 598 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 MDH1BQ5I0G3 518 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 DHX40Q8IX18 779 aaKnown RBP16.31■□□□□ 0.2
HDLBP-238ENST00000479894 SPACA3Q8IXA5 215 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 TTC39CQ8N584 583 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 FAM181AQ8N9Y4 354 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 OR5B17Q8NGF7 314 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 HPDLQ96IR7 371 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 SAMSN1Q9NSI8 373 aaKnown RBP16.31■□□□□ 0.2
HDLBP-238ENST00000479894 IL37Q9NZH6 218 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 THAP10Q9P2Z0 257 aaPredicted RBP16.31■□□□□ 0.2
HDLBP-238ENST00000479894 LIMA1Q9UHB6 759 aaKnown RBP16.31■□□□□ 0.2
HDLBP-238ENST00000479894 FBXO10Q9UK96 956 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 SLC27A6Q9Y2P4 619 aa16.31■□□□□ 0.2
HDLBP-238ENST00000479894 H0Y8X5 98 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 PES1O00541 588 aaKnown RBP16.3■□□□□ 0.2
HDLBP-238ENST00000479894 SYNCRIPO60506 623 aaKnown RBP16.3■□□□□ 0.2
HDLBP-238ENST00000479894 GREM1O60565 184 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 ZDHHC11BP0C7U3 371 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 TRIM49P0CI25 452 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 TRIM49CP0CI26 452 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 ZNF18P17022 549 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 ACO1P21399 889 aaKnown RBP16.3■□□□□ 0.2
HDLBP-238ENST00000479894 PIK3CAP42336 1068 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 DLG4P78352 724 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 NCAPHQ15003 741 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 VWA3BQ502W6 1294 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 IRF2BP1Q8IU81 584 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 UCMAQ8WVF2 138 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 WBP2Q969T9 261 aa16.3■□□□□ 0.2
HDLBP-238ENST00000479894 NDST4Q9H3R1 872 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms