RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 CD53P19397 219 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 RPS12P25398 132 aaKnown RBP6.05□□□□□ -1.44
UPF3A-205ENST00000479712 HOXD10P28358 340 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 CD6P30203 668 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 NPTX2P47972 431 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 ARL4CP56559 192 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 RPS7P62081 194 aaKnown RBP6.05□□□□□ -1.44
UPF3A-205ENST00000479712 CXADRP78310 365 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 FPGSQ05932 587 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 E2F2Q14209 437 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 RRP1BQ14684 758 aaKnown RBP6.05□□□□□ -1.44
UPF3A-205ENST00000479712 HLXQ14774 488 aaPredicted RBP6.05□□□□□ -1.44
UPF3A-205ENST00000479712 CCL15Q16663 113 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 PTCHD3Q3KNS1 767 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 CD300EQ496F6 205 aaPredicted RBP6.05□□□□□ -1.44
UPF3A-205ENST00000479712 MANEALQ5VSG8 457 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 SFRP4Q6FHJ7 346 aaPredicted RBP6.05□□□□□ -1.44
UPF3A-205ENST00000479712 RGS7BPQ6MZT1 257 aaPredicted RBP6.05□□□□□ -1.44
UPF3A-205ENST00000479712 LCNL1Q6ZST4 164 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 SLC15A3Q8IY34 581 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 ADGRG5Q8IZF4 528 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.05□□□□□ -1.44
UPF3A-205ENST00000479712 SUPT20HQ8NEM7 779 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 CPT1CQ8TCG5 803 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 SNX19Q92543 992 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 TMEM125Q96AQ2 219 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 COG3Q96JB2 828 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 FAM227BQ96M60 508 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 TEPSINQ96N21 525 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 FAM167BQ9BTA0 163 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 TMOD4Q9NZQ9 345 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 CA14Q9ULX7 337 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.05□□□□□ -1.44
UPF3A-205ENST00000479712 RIF1Q5UIP0 2472 aaKnown RBP6.05□□□□□ -1.44
UPF3A-205ENST00000479712 A0A0G2JMZ2 1700 aa6.05□□□□□ -1.44
UPF3A-205ENST00000479712 ASH1LQ9NR48 2969 aaKnown RBP6.04□□□□□ -1.44
UPF3A-205ENST00000479712 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 MYADML2A6NDP7 307 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 PRR23AA6NEV1 266 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 GRXCR1A8MXD5 290 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 FCHO1O14526 889 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 TRIAP1O43715 76 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 CCNT2O60583 730 aaKnown RBP6.04□□□□□ -1.44
UPF3A-205ENST00000479712 USP1O94782 785 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 ZFPL1O95159 310 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 ALADP13716 330 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 SLC5A2P31639 672 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 GPS1Q13098 491 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 ICAM4Q14773 271 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 RBM20Q5T481 1227 aaKnown RBP6.04□□□□□ -1.44
UPF3A-205ENST00000479712 B3GNTL1Q67FW5 361 aaPredicted RBP6.04□□□□□ -1.44
UPF3A-205ENST00000479712 TANGO2Q6ICL3 276 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 KLHL17Q6TDP4 642 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 MMS22LQ6ZRQ5 1243 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 MICALCLQ6ZW33 695 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 SIAH1Q8IUQ4 282 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 SUGP1Q8IWZ8 645 aaKnown RBP6.04□□□□□ -1.44
UPF3A-205ENST00000479712 TMEM132CQ8N3T6 1108 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 RUBCNQ92622 972 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 EDAQ92838 391 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 BADQ92934 168 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 RNF31Q96EP0 1072 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 ZNF668Q96K58 619 aaPredicted RBP6.04□□□□□ -1.44
UPF3A-205ENST00000479712 ZSCAN31Q96LW9 406 aaPredicted RBP6.04□□□□□ -1.44
UPF3A-205ENST00000479712 ADOQ96SZ5 270 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 TRIM5Q9C035 493 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 VPS33BQ9H267 617 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 PARD6AQ9NPB6 346 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 DNAJB11Q9UBS4 358 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 HERC5Q9UII4 1024 aaKnown RBP6.04□□□□□ -1.44
UPF3A-205ENST00000479712 ANAPC4Q9UJX5 808 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 DTNAQ9Y4J8 743 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 NOX1Q9Y5S8 564 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 HS3ST4Q9Y661 456 aa6.04□□□□□ -1.44
UPF3A-205ENST00000479712 MAST2Q6P0Q8 1798 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 PLXNA1Q9UIW2 1896 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 EDC4Q6P2E9 1401 aaKnown RBP6.03□□□□□ -1.44
UPF3A-205ENST00000479712 A0A0B4J269 797 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 AHRRA9YTQ3 701 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 CD3EAPO15446 510 aaKnown RBP6.03□□□□□ -1.44
UPF3A-205ENST00000479712 KRT38O76015 456 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 SRGAP2BP0DMP2 458 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 ALDH18A1P54886 795 aaKnown RBP6.03□□□□□ -1.44
UPF3A-205ENST00000479712 POLE2P56282 527 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 TUBB3Q13509 450 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 CYP2A13Q16696 494 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 GEN1Q17RS7 908 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 SPDYE7PQ495Y7 208 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 CRY2Q49AN0 593 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 CERCAMQ5T4B2 595 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 VPS53Q5VIR6 699 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 ICE2Q659A1 982 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 CYP26C1Q6V0L0 522 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 RASGRP3Q8IV61 690 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 TMEM171Q8WVE6 324 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 GRAMD1AQ96CP6 724 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 TMX4Q9H1E5 349 aaPredicted RBP6.03□□□□□ -1.44
UPF3A-205ENST00000479712 HELLSQ9NRZ9 838 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 SERTAD3Q9UJW9 196 aa6.03□□□□□ -1.44
UPF3A-205ENST00000479712 JAG2Q9Y219 1238 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms