RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 SERAC1Q96JX3 654 aa11.71□□□□□ -0.53
CCDC18-208ENST00000479653 CCNL2Q96S94 520 aaPredicted RBP11.71□□□□□ -0.53
CCDC18-208ENST00000479653 ST6GALNAC4Q9H4F1 302 aa11.71□□□□□ -0.53
CCDC18-208ENST00000479653 FBXO44Q9H4M3 255 aa11.71□□□□□ -0.53
CCDC18-208ENST00000479653 PRSS16Q9NQE7 514 aa11.71□□□□□ -0.53
CCDC18-208ENST00000479653 COMMD8Q9NX08 183 aa11.71□□□□□ -0.53
CCDC18-208ENST00000479653 FBXL12Q9NXK8 326 aa11.71□□□□□ -0.53
CCDC18-208ENST00000479653 SRPK3Q9UPE1 567 aa11.71□□□□□ -0.53
CCDC18-208ENST00000479653 SATB2Q9UPW6 733 aa11.71□□□□□ -0.53
CCDC18-208ENST00000479653 NUMA1Q14980 2115 aa11.71□□□□□ -0.54
CCDC18-208ENST00000479653 ABCA12Q86UK0 2595 aa11.71□□□□□ -0.54
CCDC18-208ENST00000479653 MYLKQ15746 1914 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 A0A1W2PR77 199 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 FAM92AA1XBS5 289 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 LRRC72A6NJI9 287 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 HMBSP08397 361 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 RARGP13631 454 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 GJB2P29033 226 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 ZNF211Q13398 564 aaPredicted RBP11.7□□□□□ -0.54
CCDC18-208ENST00000479653 WDR72Q3MJ13 1102 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 C10orf120Q5SQS8 335 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 CDCP2Q5VXM1 449 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 ZNF776Q68DI1 518 aaPredicted RBP11.7□□□□□ -0.54
CCDC18-208ENST00000479653 FAM35AQ86V20 835 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 SYCP3Q8IZU3 236 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 RBBP8NLQ8NC74 664 aaPredicted RBP11.7□□□□□ -0.54
CCDC18-208ENST00000479653 FBXO18Q8NFZ0 1043 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 RASSF8Q8NHQ8 419 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 GOLGA1Q92805 767 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 CALML4Q96GE6 196 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 SLC46A1Q96NT5 459 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 ACCSQ96QU6 501 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 TMEM245Q9H330 911 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 ERVMER34-1Q9H9K5 563 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 CYLDQ9NQC7 956 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 OSER1Q9NX31 292 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 TBC1D7Q9P0N9 293 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 ZNF510Q9Y2H8 683 aa11.7□□□□□ -0.54
CCDC18-208ENST00000479653 TLN1Q9Y490 2541 aaKnown RBP11.69□□□□□ -0.54
CCDC18-208ENST00000479653 RNASEH2AO75792 299 aaKnown RBP11.69□□□□□ -0.54
CCDC18-208ENST00000479653 STC2O76061 302 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 GJB6O95452 261 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 CST3P01034 146 aaPredicted RBP11.69□□□□□ -0.54
CCDC18-208ENST00000479653 KLKB1P03952 638 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 SFTPCP11686 197 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 ITGB6P18564 788 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 GARTP22102 1010 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 INHBCP55103 352 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 MAP3K7CLP57077 242 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 CLN3Q13286 438 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 KANSL1Q7Z3B3 1105 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 SFR1Q86XK3 245 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 SPATS2Q86XZ4 545 aaKnown RBP11.69□□□□□ -0.54
CCDC18-208ENST00000479653 HVCN1Q96D96 273 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 SMARCD1Q96GM5 515 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 CBWD1Q9BRT8 395 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 NEUROG2Q9H2A3 272 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 MRPL44Q9H9J2 332 aaKnown RBP11.69□□□□□ -0.54
CCDC18-208ENST00000479653 FBRSQ9HAH7 460 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.69□□□□□ -0.54
CCDC18-208ENST00000479653 MAN2B2Q9Y2E5 1009 aa11.69□□□□□ -0.54
CCDC18-208ENST00000479653 A0A1B0GVM2 712 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 A0A1W2PP55 124 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 FFAR2O15552 330 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 CYP26A1O43174 497 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 EFSO43281 561 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 RNASEH1O60930 286 aaKnown RBP11.68□□□□□ -0.54
CCDC18-208ENST00000479653 BEST1O76090 585 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 CLSTN1O94985 981 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 FAM163BP0C2L3 166 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 CORO1AP31146 461 aaKnown RBP11.68□□□□□ -0.54
CCDC18-208ENST00000479653 UBA7P41226 1012 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 SFSWAPQ12872 951 aaKnown RBP11.68□□□□□ -0.54
CCDC18-208ENST00000479653 KCNJ12Q14500 433 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 HIST2H2BCQ6DN03 193 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 PAQR9Q6ZVX9 377 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 USP30Q70CQ3 517 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 CHST9Q7L1S5 443 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 DYMQ7RTS9 669 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 TRAPPC11Q7Z392 1133 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 OR2T34Q8NGX1 318 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 JAKMIP2Q96AA8 810 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 OMDQ99983 421 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 SLC2A11Q9BYW1 496 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 PABPC3Q9H361 631 aaKnown RBP11.68□□□□□ -0.54
CCDC18-208ENST00000479653 MTG2Q9H4K7 406 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 NMUR1Q9HB89 426 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 LRRC4CQ9HCJ2 640 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 KRT82Q9NSB4 513 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 BLOC1S4Q9NUP1 217 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 SERGEFQ9UGK8 458 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 SUN2Q9UH99 717 aa11.68□□□□□ -0.54
CCDC18-208ENST00000479653 AGO1Q9UL18 857 aaKnown RBP11.68□□□□□ -0.54
CCDC18-208ENST00000479653 MYH11P35749 1972 aa11.67□□□□□ -0.54
CCDC18-208ENST00000479653 A0A1W2PQH9 124 aa11.67□□□□□ -0.54
CCDC18-208ENST00000479653 BLACEA4D250 179 aa11.67□□□□□ -0.54
CCDC18-208ENST00000479653 ZNF233A6NK53 670 aa11.67□□□□□ -0.54
CCDC18-208ENST00000479653 H3BQV1 296 aa11.67□□□□□ -0.54
CCDC18-208ENST00000479653 GCNT3O95395 438 aa11.67□□□□□ -0.54
CCDC18-208ENST00000479653 CCR10P46092 362 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms