RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 SCD5Q86SK9 330 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 TXLNBQ8N3L3 684 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 ARL14EPQ8N8R7 260 aaPredicted RBP9.29□□□□□ -0.92
DDX56-211ENST00000479602 SCAMP5Q8TAC9 235 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 SH3RF2Q8TEC5 729 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 USP33Q8TEY7 942 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 ZFRQ96KR1 1074 aaKnown RBP9.29□□□□□ -0.92
DDX56-211ENST00000479602 EIF3CQ99613 913 aaKnown RBP9.29□□□□□ -0.92
DDX56-211ENST00000479602 ULBP1Q9BZM6 244 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 RETREG1Q9H6L5 497 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 LUC7LQ9NQ29 371 aaKnown RBP9.29□□□□□ -0.92
DDX56-211ENST00000479602 DUS2Q9NX74 493 aaKnown RBP9.29□□□□□ -0.92
DDX56-211ENST00000479602 UVRAGQ9P2Y5 699 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 ADAMTS1Q9UHI8 967 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 WASF3Q9UPY6 502 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 PKD1L2Q7Z442 2459 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 DMXL2Q8TDJ6 3036 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 A0A087X0T9 212 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 TRAV19A0A0A6YYK7 116 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 BCLAF3A2AJT9 711 aaKnown RBP9.28□□□□□ -0.92
DDX56-211ENST00000479602 SIGLEC16A6NMB1 481 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 YJEFN3A6XGL0 299 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 E7ENQ6 273 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 TULP1O00294 542 aaPredicted RBP9.28□□□□□ -0.92
DDX56-211ENST00000479602 ARHGAP6O43182 974 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 TLR5O60602 858 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 KRT37O76014 449 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 TMEM253P0C7T8 217 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 FAM228BP0C875 321 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 HNRNPLP14866 589 aaKnown RBP eCLIP9.28□□□□□ -0.92
DDX56-211ENST00000479602 TNFAIP3P21580 790 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 NOS2P35228 1153 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 CYLC1P35663 651 aaPredicted RBP9.28□□□□□ -0.92
DDX56-211ENST00000479602 MATKP42679 507 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 YWHAGP61981 247 aaKnown RBP eCLIP9.28□□□□□ -0.92
DDX56-211ENST00000479602 COG7P83436 770 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 MESP2Q0VG99 397 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 SF3A2Q15428 464 aaKnown RBP9.28□□□□□ -0.92
DDX56-211ENST00000479602 N4BP2L1Q5TBK1 243 aaPredicted RBP9.28□□□□□ -0.92
DDX56-211ENST00000479602 NAA35Q5VZE5 725 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 BSPRYQ5W0U4 402 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 RHBDF2Q6PJF5 856 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 STRADAQ7RTN6 431 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 FAM217AQ8IXS0 508 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 PHTF2Q8N3S3 785 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 NIPA2Q8N8Q9 360 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 UBA3Q8TBC4 463 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 CENPIQ92674 756 aaPredicted RBP9.28□□□□□ -0.92
DDX56-211ENST00000479602 ANP32BQ92688 251 aaKnown RBP9.28□□□□□ -0.92
DDX56-211ENST00000479602 GOLGA1Q92805 767 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 CD101Q93033 1021 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 ATP2A3Q93084 1043 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 PLD4Q96BZ4 506 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 SLC39A13Q96H72 371 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 CCDC42Q96M95 316 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 SERPINB11Q96P15 392 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 PPP1R9BQ96SB3 815 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 NHEJ1Q9H9Q4 299 aaPredicted RBP9.28□□□□□ -0.92
DDX56-211ENST00000479602 MRPL47Q9HD33 250 aaKnown RBP9.28□□□□□ -0.92
DDX56-211ENST00000479602 PARVAQ9NVD7 372 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 ADAM22Q9P0K1 906 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 GMIPQ9P107 970 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 STAP1Q9ULZ2 295 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 MAGED2Q9UNF1 606 aaPredicted RBP9.28□□□□□ -0.92
DDX56-211ENST00000479602 SLC8A2Q9UPR5 921 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 ZNF510Q9Y2H8 683 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 PAXBP1Q9Y5B6 917 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 WNT6Q9Y6F9 365 aa9.28□□□□□ -0.92
DDX56-211ENST00000479602 KNL1Q8NG31 2342 aa9.27□□□□□ -0.92
DDX56-211ENST00000479602 AKAP13Q12802 2813 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 E2F8A0AVK6 867 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 C2CD4BA6NLJ0 364 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 LEFTY2O00292 366 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 GFRA2O00451 464 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 DCLK1O15075 740 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 PJA2O43164 708 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 NRDCO43847 1150 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 GREM1O60565 184 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 NDUFA10O95299 355 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 F9P00740 461 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 CYP1A2P05177 515 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 FYNP06241 537 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 SLC2A3P11169 496 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 ATP5C1P36542 298 aaKnown RBP9.27□□□□□ -0.93
DDX56-211ENST00000479602 EIF4A3P38919 411 aaKnown RBP9.27□□□□□ -0.93
DDX56-211ENST00000479602 KIR2DL1P43626 348 aaPredicted RBP9.27□□□□□ -0.93
DDX56-211ENST00000479602 ZNF135P52742 658 aaPredicted RBP9.27□□□□□ -0.93
DDX56-211ENST00000479602 ADKP55263 362 aaKnown RBP9.27□□□□□ -0.93
DDX56-211ENST00000479602 SCAPQ12770 1279 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 DMC1Q14565 340 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 TRIP4Q15650 581 aaPredicted RBP9.27□□□□□ -0.93
DDX56-211ENST00000479602 SLC25A52Q3SY17 297 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 STPG1Q5TH74 334 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 NUGGCQ68CJ6 796 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 CC2D1AQ6P1N0 951 aaPredicted RBP9.27□□□□□ -0.93
DDX56-211ENST00000479602 FAM183BPQ6ZVS7 135 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 CEP68Q76N32 757 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 PSTKQ8IV42 348 aaKnown RBP9.27□□□□□ -0.93
DDX56-211ENST00000479602 RHOT2Q8IXI1 618 aa9.27□□□□□ -0.93
DDX56-211ENST00000479602 CPA6Q8N4T0 437 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms