RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 TNFSF9P41273 254 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 IPO11Q9UI26 975 aaKnown RBP13.86□□□□□ -0.19
USP42-206ENST00000479544 RPL26L1Q9UNX3 145 aaKnown RBP13.86□□□□□ -0.19
USP42-206ENST00000479544 DRG1Q9Y295 367 aaKnown RBP13.86□□□□□ -0.19
USP42-206ENST00000479544 PLLPQ9Y342 182 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 C3orf70A6NLC5 250 aaPredicted RBP13.86□□□□□ -0.19
USP42-206ENST00000479544 E5RJQ4 531 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 CHEK2O96017 543 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 ITGAVP06756 1048 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 ITGA2BP08514 1039 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 LSM3P62310 102 aaKnown RBP13.86□□□□□ -0.19
USP42-206ENST00000479544 GTF2BQ00403 316 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 CYP1B1Q16678 543 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 MICU2Q8IYU8 434 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 PCYOX1LQ8NBM8 494 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 TUBGCP3Q96CW5 907 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 ZFRQ96KR1 1074 aaKnown RBP13.86□□□□□ -0.19
USP42-206ENST00000479544 CEP19Q96LK0 163 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 CGRRF1Q99675 332 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 NPAS2Q99743 824 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 SLC4A5Q9BY07 1137 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 DGCR6LQ9BY27 220 aa13.86□□□□□ -0.19
USP42-206ENST00000479544 TSPAN3O60637 253 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 SIN3BO75182 1162 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 DAB1O75553 588 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 KCNA2P16389 499 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 ABCD1P33897 745 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 NUP107P57740 925 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 ARL13BQ3SXY8 428 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 LDLRAP1Q5SW96 308 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 ANGPTL8Q6UXH0 198 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 RIN3Q8TB24 985 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 LENG8Q96PV6 779 aaPredicted RBP13.85□□□□□ -0.19
USP42-206ENST00000479544 XPNPEP3Q9NQH7 507 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 DAPK2Q9UIK4 370 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 CDH22Q9UJ99 828 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 ZNF180Q9UJW8 692 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 STAP1Q9ULZ2 295 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 LRRC37A3O60309 1634 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 TRMUO75648 421 aaKnown RBP13.85□□□□□ -0.19
USP42-206ENST00000479544 JCHAINP01591 159 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 DPEP1P16444 411 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 GRIA3P42263 894 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 HSPA13P48723 471 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 POU6F1Q14863 301 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 TREML1Q86YW5 311 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 FAM47BQ8NA70 645 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 VCPIP1Q96JH7 1222 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 PANX3Q96QZ0 392 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 SGIP1Q9BQI5 828 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 BRD8Q9H0E9 1235 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 GGA3Q9NZ52 723 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 AP4E1Q9UPM8 1137 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 AP4S1Q9Y587 144 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 TMEM191CA6NGB0 347 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 BPGMP07738 259 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 VIL1P09327 827 aaKnown RBP13.85□□□□□ -0.19
USP42-206ENST00000479544 STMN1P16949 149 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 PTPN7P35236 360 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 ABCE1P61221 599 aaKnown RBP13.85□□□□□ -0.19
USP42-206ENST00000479544 ADGRD1Q6QNK2 874 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 TMC7Q7Z402 723 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 UNC5BQ8IZJ1 945 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 BANPQ8N9N5 519 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 SLC7A14Q8TBB6 771 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 FAM151AQ8WW52 585 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 SLC44A1Q8WWI5 657 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 RMI1Q9H9A7 625 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 POLR1BQ9H9Y6 1135 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 DNAAF2Q9NVR5 837 aaKnown RBP13.85□□□□□ -0.19
USP42-206ENST00000479544 ZNF358Q9NW07 568 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 SELENONQ9NZV5 590 aa13.85□□□□□ -0.19
USP42-206ENST00000479544 EEF2KO00418 725 aaKnown RBP13.84□□□□□ -0.19
USP42-206ENST00000479544 OGTO15294 1046 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 BAIAP3O94812 1187 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 MT-ND1P03886 318 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 CHRM1P11229 460 aaPredicted RBP13.84□□□□□ -0.19
USP42-206ENST00000479544 HADHAP40939 763 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 EFNA5P52803 228 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 NR1H2P55055 460 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 SNRPFP62306 86 aaKnown RBP13.84□□□□□ -0.19
USP42-206ENST00000479544 RALGDSQ12967 914 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 ZACNQ401N2 412 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 MTX3Q5HYI7 312 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 BBS12Q6ZW61 710 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 ARMCX2Q7L311 632 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 SETD3Q86TU7 594 aaPredicted RBP13.84□□□□□ -0.19
USP42-206ENST00000479544 CCDC60Q8IWA6 550 aaPredicted RBP13.84□□□□□ -0.19
USP42-206ENST00000479544 TRAPPC12Q8WVT3 735 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 CASP10Q92851 521 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 HSPBAP1Q96EW2 488 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 SPATA33Q96N06 139 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 APBA2Q99767 749 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 NDEL1Q9GZM8 345 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 POMPQ9Y244 141 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 TNS1Q9HBL0 1735 aaKnown RBP13.84□□□□□ -0.19
USP42-206ENST00000479544 ZNF536O15090 1300 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 HUS1O60921 280 aa13.84□□□□□ -0.19
USP42-206ENST00000479544 CST3P01034 146 aaPredicted RBP13.84□□□□□ -0.19
USP42-206ENST00000479544 GRM1Q13255 1194 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms