RNA–Protein interactions for RNA: ENST00000479230.5

GNL3-208, Transcript of G protein nucleolar 3, human

TSL 4

Gene GNL3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNL3-208	ENST00000479230	UEVLD	Q8IX04	471 aa		6.26	□□□□□ -1.41
GNL3-208	ENST00000479230	PIGO	Q8TEQ8	1089 aa		6.26	□□□□□ -1.41
GNL3-208	ENST00000479230	SMG7	Q92540	1137 aa	Known RBP	6.26	□□□□□ -1.41
GNL3-208	ENST00000479230	PIGK	Q92643	395 aa		6.26	□□□□□ -1.41
GNL3-208	ENST00000479230	MCRS1	Q96EZ8	462 aa		6.26	□□□□□ -1.41
GNL3-208	ENST00000479230	SIGLEC11	Q96RL6	698 aa		6.26	□□□□□ -1.41
GNL3-208	ENST00000479230	KATNAL1	Q9BW62	490 aa		6.26	□□□□□ -1.41
GNL3-208	ENST00000479230	TOP3B	O95985	862 aa	Known RBP	6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	ITGA2B	P08514	1039 aa		6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	CD63	P08962	238 aa		6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	ETFDH	Q16134	617 aa		6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	TRIM60	Q495X7	471 aa		6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	SLC9C1	Q4G0N8	1177 aa		6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	ZNF425	Q6IV72	752 aa		6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	C11orf87	Q6NUJ2	197 aa		6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	WDR93	Q6P2C0	686 aa		6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	BCAS4	Q8TDM0	211 aa		6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	POF1B	Q8WVV4	589 aa		6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	COQ8B	Q96D53	544 aa		6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	TRMT61A	Q96FX7	289 aa	Known RBP	6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	TRIM2	Q9C040	744 aa		6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	MLXIPL	Q9NP71	852 aa		6.25	□□□□□ -1.41
GNL3-208	ENST00000479230	ENO1	P06733	434 aa	Known RBP	6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	CTSA	P10619	480 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	HOXA7	P31268	230 aa	Predicted RBP	6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	SERPINF1	P36955	418 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	POLE2	P56282	527 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	ID2	Q02363	134 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	TLE3	Q04726	772 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	ZNF91	Q05481	1191 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	CHAF1A	Q13111	956 aa	Predicted RBP	6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	MTA1	Q13330	715 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	OS9	Q13438	667 aa	Predicted RBP	6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	SRFBP1	Q8NEF9	429 aa	Known RBP	6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	VPS37A	Q8NEZ2	397 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	REXO5	Q96IC2	774 aa	Known RBP	6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	RMDN3	Q96TC7	470 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	KRTAP9-8	Q9BYQ0	159 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	VPS16	Q9H269	839 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	ERVK-5	Q9HDB9	667 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	B3GNT3	Q9Y2A9	372 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	ZBTB1	Q9Y2K1	713 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	EMSY	Q7Z589	1322 aa		6.24	□□□□□ -1.41
GNL3-208	ENST00000479230	C2CD4B	A6NLJ0	364 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	KIF28P	B7ZC32	967 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230		M0QYT0	321 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	SGPL1	O95470	568 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	ST6GAL1	P15907	406 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	HOXD9	P28356	352 aa	Predicted RBP	6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	SOX2	P48431	317 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	SLC12A2	P55011	1212 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	STIM1	Q13586	685 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	BLMH	Q13867	455 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	EARS2	Q5JPH6	523 aa	Known RBP	6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	ATPAF1	Q5TC12	328 aa	Predicted RBP	6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	ANKRD40	Q6AI12	368 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	GLCCI1	Q86VQ1	547 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	ATG16L2	Q8NAA4	619 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	IGFBPL1	Q8WX77	278 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	GPR78	Q96P69	363 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	TMEM79	Q9BSE2	394 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	RTKN	Q9BST9	563 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	CCDC134	Q9H6E4	229 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	PRDM16	Q9HAZ2	1276 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	TRNAU1AP	Q9NX07	287 aa	Known RBP	6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	HERC5	Q9UII4	1024 aa	Known RBP	6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	CNTN6	Q9UQ52	1028 aa		6.23	□□□□□ -1.41
GNL3-208	ENST00000479230	SLC22A23	A1A5C7	686 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	FAM90A18P	A6NE21	464 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	FAM90A16P	A6NEW6	464 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	C3orf70	A6NLC5	250 aa	Predicted RBP	6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	FAM90A9P	A6NNJ1	464 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	FAM90A5P	A8MXJ8	464 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	ADAM10	O14672	748 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	TLR2	O60603	784 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	CNOT3	O75175	753 aa	Known RBP	6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	MOSPD3	O75425	235 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	LARGE1	O95461	756 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	CSTB	P04080	98 aa	Known RBP	6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	FAM90A15P	P0C7V4	464 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	FAM90A14P	P0C7W9	464 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	AKR1A1	P14550	325 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	TFEB	P19484	476 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	TAS2R50	P59544	299 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	RPL15	P61313	204 aa	Known RBP	6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	SF3A3	Q12874	501 aa	Known RBP eCLIP	6.22	□□□□□ -1.41	9e-7	■■■■□ 24.7
GNL3-208	ENST00000479230	KRT72	Q14CN4	511 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	BTBD16	Q32M84	506 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	ZNF569	Q5MCW4	686 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	C10orf25	Q5T742	122 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	PXDC1	Q5TGL8	231 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	SLC39A5	Q6ZMH5	540 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	RHPN2	Q8IUC4	686 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	ADPRHL1	Q8NDY3	354 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	OR1N1	Q8NGS0	311 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	C16orf52	Q8NHV5	167 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	TMEM184C	Q9NVA4	438 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	DACT1	Q9NYF0	836 aa		6.22	□□□□□ -1.41
GNL3-208	ENST00000479230	ACKR2	O00590	384 aa		6.21	□□□□□ -1.42
GNL3-208	ENST00000479230	TRIM38	O00635	465 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms