RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 RPL13P26373 211 aaKnown RBP12.53□□□□□ -0.4
GCA-208ENST00000479199 SYKP43405 635 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 AFF3P51826 1226 aaKnown RBP12.53□□□□□ -0.4
GCA-208ENST00000479199 NDUFA8P51970 172 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 ENPEPQ07075 957 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 PDE4CQ08493 712 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 DPYDQ12882 1025 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 ADAM9Q13443 819 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 PTPRNQ16849 979 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 MPPE1Q53F39 396 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 CHST9Q7L1S5 443 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 SMYD4Q8IYR2 804 aaPredicted RBP12.53□□□□□ -0.4
GCA-208ENST00000479199 ANKRD52Q8NB46 1076 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 FBXL13Q8NEE6 735 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 WFDC5Q8TCV5 224 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 EDEM1Q92611 657 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 TATDN2Q93075 761 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 CCDC47Q96A33 483 aaKnown RBP12.53□□□□□ -0.4
GCA-208ENST00000479199 UBXN6Q9BZV1 441 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 PCED1AQ9H1Q7 454 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 TMEM245Q9H330 911 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 ABCB8Q9NUT2 735 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 TSPAN16Q9UKR8 245 aa12.53□□□□□ -0.4
GCA-208ENST00000479199 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.53□□□□□ -0.4
GCA-208ENST00000479199 ARID1BQ8NFD5 2236 aaPredicted RBP12.53□□□□□ -0.4
GCA-208ENST00000479199 KCNK3O14649 394 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 XPO1O14980 1071 aaKnown RBP12.52□□□□□ -0.41
GCA-208ENST00000479199 DKK1O94907 266 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 SEMA4FO95754 770 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 PABPC1P11940 636 aaKnown RBP12.52□□□□□ -0.41
GCA-208ENST00000479199 GTF2H1P32780 548 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 HARS2P49590 506 aaKnown RBP12.52□□□□□ -0.41
GCA-208ENST00000479199 BCAT1P54687 386 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 E2F5Q15329 346 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 PM20D1Q6GTS8 502 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 TMPRSS7Q7RTY8 843 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 ADIPOR2Q86V24 386 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 GUF1Q8N442 669 aaKnown RBP12.52□□□□□ -0.41
GCA-208ENST00000479199 TTC39CQ8N584 583 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 RHBDD1Q8TEB9 315 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 WFIKKN2Q8TEU8 576 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 MTG2Q9H4K7 406 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 LRRC4Q9HBW1 653 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 TM9SF3Q9HD45 589 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 PRSS16Q9NQE7 514 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 OLA1Q9NTK5 396 aaKnown RBP12.52□□□□□ -0.41
GCA-208ENST00000479199 RAB20Q9NX57 234 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 KIAA1522Q9P206 1035 aaPredicted RBP12.52□□□□□ -0.41
GCA-208ENST00000479199 GGA2Q9UJY4 613 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 HBS1LQ9Y450 684 aaKnown RBP12.52□□□□□ -0.41
GCA-208ENST00000479199 PCDHGB2Q9Y5G2 931 aa12.52□□□□□ -0.41
GCA-208ENST00000479199 FAM149AA5PLN7 773 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 YJEFN3A6XGL0 299 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 E7ENQ6 273 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 TIMM44O43615 452 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 FSBPO95073 299 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 CD19P15391 556 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 CD70P32970 193 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 GRIA4P48058 902 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 SLC8A3P57103 927 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 RPS14P62263 151 aaKnown RBP12.51□□□□□ -0.41
GCA-208ENST00000479199 IL9RQ01113 521 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 BST2Q10589 180 aaKnown RBP12.51□□□□□ -0.41
GCA-208ENST00000479199 CBWD6Q4V339 395 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 SOWAHCQ53LP3 525 aaPredicted RBP12.51□□□□□ -0.41
GCA-208ENST00000479199 CCDC157Q569K6 752 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 DCAF17Q5H9S7 520 aaPredicted RBP12.51□□□□□ -0.41
GCA-208ENST00000479199 CBWD3Q5JTY5 395 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 KCNT1Q5JUK3 1230 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 CBWD5Q5RIA9 395 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 BSPRYQ5W0U4 402 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 MBLAC2Q68D91 279 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 RFWD3Q6PCD5 774 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 DBX2Q6ZNG2 339 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 AHI1Q8N157 1196 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 SIX6OS1Q8N1H7 587 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.51□□□□□ -0.41
GCA-208ENST00000479199 UBA3Q8TBC4 463 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 RNF139Q8WU17 664 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 HNRNPLLQ8WVV9 542 aaKnown RBP12.51□□□□□ -0.41
GCA-208ENST00000479199 BIRC7Q96CA5 298 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 SPATA32Q96LK8 384 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 IPO9Q96P70 1041 aaKnown RBP12.51□□□□□ -0.41
GCA-208ENST00000479199 CDC6Q99741 560 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 GOLPH3LQ9H4A5 285 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 STOML2Q9UJZ1 356 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 ANKRD6Q9Y2G4 727 aa12.51□□□□□ -0.41
GCA-208ENST00000479199 TDRD6O60522 2096 aaKnown RBP12.5□□□□□ -0.41
GCA-208ENST00000479199 FAM237AA0A1B0GTK4 181 aa12.5□□□□□ -0.41
GCA-208ENST00000479199 H0Y8X5 98 aa12.5□□□□□ -0.41
GCA-208ENST00000479199 DNTTP04053 509 aa12.5□□□□□ -0.41
GCA-208ENST00000479199 EPB41P11171 864 aaKnown RBP12.5□□□□□ -0.41
GCA-208ENST00000479199 SLC6A4P31645 630 aa12.5□□□□□ -0.41
GCA-208ENST00000479199 CCT8P50990 548 aa12.5□□□□□ -0.41
GCA-208ENST00000479199 ZNF445P59923 1031 aa12.5□□□□□ -0.41
GCA-208ENST00000479199 MCCD1P59942 119 aaPredicted RBP12.5□□□□□ -0.41
GCA-208ENST00000479199 CUL2Q13617 745 aa12.5□□□□□ -0.41
GCA-208ENST00000479199 TEAD4Q15561 434 aa12.5□□□□□ -0.41
GCA-208ENST00000479199 EDRF1Q3B7T1 1238 aa12.5□□□□□ -0.41
GCA-208ENST00000479199 TTC31Q49AM3 519 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms