RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 PIK3R2O00459 728 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 DNTTP04053 509 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 ATP5BP06576 529 aaKnown RBP13.8□□□□□ -0.2
VCL-205ENST00000478896 RGS7P49802 495 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 DAOAP59103 153 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 MCCD1P59942 119 aaPredicted RBP13.8□□□□□ -0.2
VCL-205ENST00000478896 CAMK2GQ13555 558 aaPredicted RBP13.8□□□□□ -0.2
VCL-205ENST00000478896 TEAD4Q15561 434 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 HLA-BQ31612 363 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 TTC31Q49AM3 519 aaPredicted RBP13.8□□□□□ -0.2
VCL-205ENST00000478896 ADGRF1Q5T601 910 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 MBLAC2Q68D91 279 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 TMEM270Q6UE05 265 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 KCTD13Q8WZ19 329 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 BTBD1Q9H0C5 482 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 PCED1AQ9H1Q7 454 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 C6orf106Q9H6K1 298 aaPredicted RBP13.8□□□□□ -0.2
VCL-205ENST00000478896 FBRSQ9HAH7 460 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 ARMCX3Q9UH62 379 aaPredicted RBP13.8□□□□□ -0.2
VCL-205ENST00000478896 STOML2Q9UJZ1 356 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 LHX6Q9UPM6 363 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 FNDC3AQ9Y2H6 1198 aaKnown RBP13.8□□□□□ -0.2
VCL-205ENST00000478896 COQ4Q9Y3A0 265 aa13.8□□□□□ -0.2
VCL-205ENST00000478896 A0A1B0GVT2 93 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 FAM221BA6H8Z2 402 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 GOLGA6L4A6NEF3 574 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 M0QYV0 167 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 FLRT2O43155 660 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 TBL1XO60907 577 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 SEMA4FO95754 770 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 ZNF883P0CG24 379 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 POLR2EP19388 210 aaKnown RBP13.79□□□□□ -0.2
VCL-205ENST00000478896 ACSL1P33121 698 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 SLC11A2P49281 568 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 CSNK1EP49674 416 aaKnown RBP13.79□□□□□ -0.2
VCL-205ENST00000478896 SGSHP51688 502 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 AFF3P51826 1226 aaKnown RBP13.79□□□□□ -0.2
VCL-205ENST00000478896 LRRC63Q05C16 580 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 RING1Q06587 406 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 SCAPQ12770 1279 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 NUGGCQ68CJ6 796 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 ANKRD40Q6AI12 368 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 RFWD3Q6PCD5 774 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 ADAT2Q7Z6V5 191 aaKnown RBP13.79□□□□□ -0.2
VCL-205ENST00000478896 PROSER1Q86XN7 944 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 MFN1Q8IWA4 741 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 UNC45BQ8IWX7 931 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 ZNF557Q8N988 423 aaPredicted RBP13.79□□□□□ -0.2
VCL-205ENST00000478896 NT5C1BQ96P26 610 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 GSDMAQ96QA5 445 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 TMEM245Q9H330 911 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 STIM2Q9P246 746 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 PCDHB4Q9Y5E5 795 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 NUMA1Q14980 2115 aa13.79□□□□□ -0.2
VCL-205ENST00000478896 TP53BP1Q12888 1972 aaPredicted RBP13.78□□□□□ -0.2
VCL-205ENST00000478896 ASPMQ8IZT6 3477 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 GOLGA8CPA6NN73 597 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 CBFA2T3O75081 653 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 FSBPO95073 299 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 SMC2O95347 1197 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 LTFP02788 710 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 PAEPP09466 180 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 DLDP09622 509 aaKnown RBP13.78□□□□□ -0.2
VCL-205ENST00000478896 PMS1P54277 932 aaKnown RBP13.78□□□□□ -0.2
VCL-205ENST00000478896 ST8SIA6P61647 398 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 ZBTB16Q05516 673 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 STIM1Q13586 685 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 SUZ12Q15022 739 aaKnown RBP13.78□□□□□ -0.2
VCL-205ENST00000478896 PTPRNQ16849 979 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 CCDC40Q4G0X9 1142 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 COBLL1Q53SF7 1204 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 ZNF776Q68DI1 518 aaPredicted RBP13.78□□□□□ -0.2
VCL-205ENST00000478896 MSANTD2Q6P1R3 559 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 LCLAT1Q6UWP7 414 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 GLRX5Q86SX6 157 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 ADIPOR2Q86V24 386 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 CCDC117Q8IWD4 279 aaPredicted RBP13.78□□□□□ -0.2
VCL-205ENST00000478896 SCML4Q8N228 414 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 PPM1KQ8N3J5 372 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.78□□□□□ -0.2
VCL-205ENST00000478896 WFDC5Q8TCV5 224 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 RHBDD1Q8TEB9 315 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 GANCQ8TET4 914 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 SMARCE1Q969G3 411 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 SLC35C1Q96A29 364 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 METTL14Q9HCE5 456 aaKnown RBP13.78□□□□□ -0.2
VCL-205ENST00000478896 PRSS16Q9NQE7 514 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 SUN2Q9UH99 717 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 KIAA1257Q9ULG3 409 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.78□□□□□ -0.2
VCL-205ENST00000478896 FRYQ5TBA9 3013 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 PTPRBP23467 1997 aa13.78□□□□□ -0.2
VCL-205ENST00000478896 GOLGA6L7A0A1B0GV03 622 aa13.77□□□□□ -0.21
VCL-205ENST00000478896 PSMA7O14818 248 aa13.77□□□□□ -0.21
VCL-205ENST00000478896 IRAK2O43187 625 aa13.77□□□□□ -0.21
VCL-205ENST00000478896 ACSL4O60488 711 aa13.77□□□□□ -0.21
VCL-205ENST00000478896 BRD2P25440 801 aaKnown RBP13.77□□□□□ -0.21
VCL-205ENST00000478896 CD70P32970 193 aa13.77□□□□□ -0.21
VCL-205ENST00000478896 GRIA4P48058 902 aa13.77□□□□□ -0.21
VCL-205ENST00000478896 FMO5P49326 533 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms