RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SPRP35270 261 aaPredicted RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 TXKP42681 527 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 RPP30P78346 268 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 PDSS1Q5T2R2 415 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 PPP1R18Q6NYC8 613 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 ZFP1Q6P2D0 407 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 FAM20CQ8IXL6 584 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 IQCF2Q8IXL9 164 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 OR4C15Q8NGM1 316 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 NKX2-3Q8TAU0 364 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 KCNJ9Q92806 393 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 TSR2Q969E8 191 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 C7orf25Q9BPX7 421 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 ZNF577Q9BSK1 485 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 CDADC1Q9BWV3 514 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 MRPL4Q9BYD3 311 aaKnown RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 DPY30Q9C005 99 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 DCLK3Q9C098 648 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 TRPV5Q9NQA5 729 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 MOCS1Q9NZB8 636 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 GCNT4Q9P109 453 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 RIPK3Q9Y572 518 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 NPIPA7E9PJI5 369 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 NPIPA8P0DM63 369 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 SLC1A2P43004 574 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 TPI1P60174 286 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 ADAM9Q13443 819 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 SEMA5AQ13591 1074 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 DSG2Q14126 1118 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 STAT4Q14765 748 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 WDR59Q6PJI9 974 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 BEND4Q6ZU67 534 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 ZNF548Q8NEK5 533 aaPredicted RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 TRPM4Q8TD43 1214 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 CINPQ9BW66 212 aaPredicted RBP5.55□□□□□ -1.52
USF3-202ENST00000478658 PANK2Q9BZ23 570 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 GOLPH3Q9H4A6 298 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 CMTM6Q9NX76 183 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 KCTD5Q9NXV2 234 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 MAN1B1Q9UKM7 699 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 MED23Q9ULK4 1368 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 A0A1B0GTH6 734 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 C2orf78A6NCI8 922 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 K7ERI5 159 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 XYLBO75191 536 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 CRTAMO95727 393 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 HLA-DQA2P01906 255 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 CACNA2D1P54289 1103 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 MLLT6P55198 1093 aaPredicted RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 FKBP3Q00688 224 aaKnown RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 SLFN5Q08AF3 891 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 RRS1Q15050 365 aaKnown RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 PDK1Q15118 436 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PLEKHN1Q494U1 663 aaPredicted RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 GARNL3Q5VVW2 1013 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ATG9AQ7Z3C6 839 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 TIGD4Q8IY51 512 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 INO80EQ8NBZ0 244 aaPredicted RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 HEXDCQ8WVB3 486 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 GPR63Q9BZJ6 419 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 TOR3AQ9H497 397 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 CNTN3Q9P232 1028 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 HMGXB4Q9UGU5 601 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 CROTQ9UKG9 612 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 POLR1AO95602 1720 aaPredicted RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 MYO15BQ96JP2 1530 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 GIMD1P0DJR0 217 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PRG2P13727 222 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 CHN1P15882 459 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PITPNAQ00169 270 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 GRIK3Q13003 919 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 SLC27A3Q5K4L6 730 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 RNASEH2BQ5TBB1 312 aaKnown RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 LCN1P1Q5VSP4 162 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ESPNLQ6ZVH7 1005 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 CHST15Q7LFX5 561 aaPredicted RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 C6orf120Q7Z4R8 191 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PIGWQ7Z7B1 504 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ZER1Q7Z7L7 766 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 TMEM132CQ8N3T6 1108 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ATP6V0D2Q8N8Y2 350 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 DQX1Q8TE96 717 aaKnown RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 TRIB2Q92519 343 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 NINJ1Q92982 152 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 RAB39BQ96DA2 213 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ZNF333Q96JL9 665 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 NUDT9Q9BW91 350 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 NPLQ9BXD5 320 aaPredicted RBP5.54□□□□□ -1.52
USF3-202ENST00000478658 NENFQ9UMX5 172 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 GRIP1Q9Y3R0 1128 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PRXQ9BXM0 1461 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 CLCA1A8K7I4 914 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 RASA4BC9J798 803 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 RASA4O43374 803 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 NOL4O94818 638 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 TTLL1O95922 423 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ASNSP08243 561 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 PRDX6P30041 224 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 FANCCQ00597 558 aa5.54□□□□□ -1.52
USF3-202ENST00000478658 ZNF57Q68EA5 555 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms