RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 BTN2A3PQ96KV6 586 aa27.8■■■□□ 2.04
CCM2-211ENST00000478582 MCEEQ96PE7 176 aa27.8■■■□□ 2.04
CCM2-211ENST00000478582 IER2Q9BTL4 223 aa27.8■■■□□ 2.04
CCM2-211ENST00000478582 PIGVQ9NUD9 493 aa27.8■■■□□ 2.04
CCM2-211ENST00000478582 SLC12A6Q9UHW9 1150 aa27.8■■■□□ 2.04
CCM2-211ENST00000478582 SCINQ9Y6U3 715 aa27.8■■■□□ 2.04
CCM2-211ENST00000478582 TRDMT1O14717 391 aaKnown RBP27.79■■■□□ 2.04
CCM2-211ENST00000478582 ZNF143P52747 638 aaPredicted RBP27.79■■■□□ 2.04
CCM2-211ENST00000478582 DEUP1Q05D60 604 aa27.79■■■□□ 2.04
CCM2-211ENST00000478582 BRMS1LQ5PSV4 323 aa27.79■■■□□ 2.04
CCM2-211ENST00000478582 DCUN1D2Q6PH85 259 aa27.79■■■□□ 2.04
CCM2-211ENST00000478582 SND1Q7KZF4 910 aaKnown RBP eCLIP27.79■■■□□ 2.04
CCM2-211ENST00000478582 STRADAQ7RTN6 431 aa27.79■■■□□ 2.04
CCM2-211ENST00000478582 DDX50Q9BQ39 737 aaKnown RBP27.79■■■□□ 2.04
CCM2-211ENST00000478582 MRPL47Q9HD33 250 aaKnown RBP27.79■■■□□ 2.04
CCM2-211ENST00000478582 PAXBP1Q9Y5B6 917 aa27.79■■■□□ 2.04
CCM2-211ENST00000478582 SYNJ2BP-COX16A0A087WUM0 186 aa27.78■■■□□ 2.04
CCM2-211ENST00000478582 ATMINO43313 823 aaPredicted RBP27.78■■■□□ 2.04
CCM2-211ENST00000478582 RDXP35241 583 aaKnown RBP27.78■■■□□ 2.04
CCM2-211ENST00000478582 EIF2DP41214 584 aaKnown RBP27.78■■■□□ 2.04
CCM2-211ENST00000478582 GALCP54803 685 aa27.78■■■□□ 2.04
CCM2-211ENST00000478582 MTAPQ13126 283 aa27.78■■■□□ 2.04
CCM2-211ENST00000478582 LRRC32Q14392 662 aa27.78■■■□□ 2.04
CCM2-211ENST00000478582 ZNF528Q3MIS6 628 aa27.78■■■□□ 2.04
CCM2-211ENST00000478582 FAM133BQ5BKY9 247 aaKnown RBP27.78■■■□□ 2.04
CCM2-211ENST00000478582 RNF34Q969K3 372 aa27.78■■■□□ 2.04
CCM2-211ENST00000478582 EXOC4Q96A65 974 aa27.78■■■□□ 2.04
CCM2-211ENST00000478582 THAP2Q9H0W7 228 aa27.78■■■□□ 2.04
CCM2-211ENST00000478582 WDCPQ9H6R7 721 aa27.78■■■□□ 2.04
CCM2-211ENST00000478582 ARHGEF38Q9NXL2 777 aa27.78■■■□□ 2.04
CCM2-211ENST00000478582 COX16Q9P0S2 106 aa27.78■■■□□ 2.04
CCM2-211ENST00000478582 TMEM191CA6NGB0 347 aa27.77■■■□□ 2.04
CCM2-211ENST00000478582 PENKP01210 267 aaPredicted RBP27.77■■■□□ 2.04
CCM2-211ENST00000478582 CYP1A2P05177 515 aa27.77■■■□□ 2.04
CCM2-211ENST00000478582 ABCB4P21439 1286 aa27.77■■■□□ 2.04
CCM2-211ENST00000478582 OPRD1P41143 372 aa27.77■■■□□ 2.04
CCM2-211ENST00000478582 ATP11AP98196 1134 aa27.77■■■□□ 2.04
CCM2-211ENST00000478582 PON2Q15165 354 aa27.77■■■□□ 2.04
CCM2-211ENST00000478582 DGKKQ5KSL6 1271 aa27.77■■■□□ 2.04
CCM2-211ENST00000478582 NADSYN1Q6IA69 706 aa27.77■■■□□ 2.04
CCM2-211ENST00000478582 TPGS1Q6ZTW0 290 aa27.77■■■□□ 2.04
CCM2-211ENST00000478582 CCDC170Q8IYT3 715 aa27.77■■■□□ 2.04
CCM2-211ENST00000478582 SPC24Q8NBT2 197 aa27.77■■■□□ 2.04
CCM2-211ENST00000478582 FNIP1Q8TF40 1166 aa27.77■■■□□ 2.04
CCM2-211ENST00000478582 NKD2Q969F2 451 aaPredicted RBP27.77■■■□□ 2.04
CCM2-211ENST00000478582 GFRA3O60609 400 aa27.76■■■□□ 2.03
CCM2-211ENST00000478582 CSTF1Q05048 431 aaKnown RBP27.76■■■□□ 2.03
CCM2-211ENST00000478582 C15orf59Q2T9L4 293 aaPredicted RBP27.76■■■□□ 2.03
CCM2-211ENST00000478582 ANO4Q32M45 955 aa27.76■■■□□ 2.03
CCM2-211ENST00000478582 TMTC1Q8IUR5 882 aa27.76■■■□□ 2.03
CCM2-211ENST00000478582 ETFBKMTQ8IXQ9 262 aa27.76■■■□□ 2.03
CCM2-211ENST00000478582 P2RY13Q9BPV8 354 aa27.76■■■□□ 2.03
CCM2-211ENST00000478582 CNPY3Q9BT09 278 aa27.76■■■□□ 2.03
CCM2-211ENST00000478582 BBS2Q9BXC9 721 aa27.76■■■□□ 2.03
CCM2-211ENST00000478582 MYO1AQ9UBC5 1043 aa27.76■■■□□ 2.03
CCM2-211ENST00000478582 XPO7Q9UIA9 1087 aaKnown RBP27.76■■■□□ 2.03
CCM2-211ENST00000478582 GOLGA6L7A0A1B0GV03 622 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 CACNG3O60359 315 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 MOCS2O96007 188 aaPredicted RBP27.75■■■□□ 2.03
CCM2-211ENST00000478582 CYBBP04839 570 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 H2AFZP0C0S5 128 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 SLC6A4P31645 630 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 GALK1P51570 392 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 MPPE1Q53F39 396 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 TMEM196Q5HYL7 178 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 SH3PXD2AQ5TCZ1 1133 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 FYB2Q5VWT5 728 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 H2AFVQ71UI9 128 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 CD101Q93033 1021 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 P2RY11Q96G91 374 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 SEMA4AQ9H3S1 761 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 RBM12Q9NTZ6 932 aaKnown RBP27.75■■■□□ 2.03
CCM2-211ENST00000478582 SPTLC3Q9NUV7 552 aa27.75■■■□□ 2.03
CCM2-211ENST00000478582 FANCMQ8IYD8 2048 aa27.74■■■□□ 2.03
CCM2-211ENST00000478582 GOLGA6L6A8MZA4 724 aa27.74■■■□□ 2.03
CCM2-211ENST00000478582 NEDD8-MDP1E9PL57 170 aa27.74■■■□□ 2.03
CCM2-211ENST00000478582 LCA5LO95447 670 aa27.74■■■□□ 2.03
CCM2-211ENST00000478582 TYRP14679 529 aa27.74■■■□□ 2.03
CCM2-211ENST00000478582 ATXN1P54253 815 aaKnown RBP27.74■■■□□ 2.03
CCM2-211ENST00000478582 OGDHQ02218 1023 aa27.74■■■□□ 2.03
CCM2-211ENST00000478582 C10orf76Q5T2E6 689 aa27.74■■■□□ 2.03
CCM2-211ENST00000478582 MPP7Q5T2T1 576 aa27.74■■■□□ 2.03
CCM2-211ENST00000478582 ACBD5Q5T8D3 534 aaPredicted RBP27.74■■■□□ 2.03
CCM2-211ENST00000478582 PIK3R6Q5UE93 754 aa27.74■■■□□ 2.03
CCM2-211ENST00000478582 ZC3H14Q6PJT7 736 aaKnown RBP27.74■■■□□ 2.03
CCM2-211ENST00000478582 ASCL5Q7RTU5 278 aa27.74■■■□□ 2.03
CCM2-211ENST00000478582 FAM172AQ8WUF8 416 aa27.74■■■□□ 2.03
CCM2-211ENST00000478582 TMA16Q96EY4 203 aaKnown RBP27.74■■■□□ 2.03
CCM2-211ENST00000478582 XPO6Q96QU8 1125 aaKnown RBP27.74■■■□□ 2.03
CCM2-211ENST00000478582 PRMT1Q99873 361 aaKnown RBP27.74■■■□□ 2.03
CCM2-211ENST00000478582 TKTL2Q9H0I9 626 aa27.74■■■□□ 2.03
CCM2-211ENST00000478582 PRMT8Q9NR22 394 aaPredicted RBP27.74■■■□□ 2.03
CCM2-211ENST00000478582 FBXO10Q9UK96 956 aa27.74■■■□□ 2.03
CCM2-211ENST00000478582 R4GN57 208 aa27.74■■■□□ 2.03
CCM2-211ENST00000478582 PRR23AA6NEV1 266 aa27.73■■■□□ 2.03
CCM2-211ENST00000478582 CCP110O43303 1012 aa27.73■■■□□ 2.03
CCM2-211ENST00000478582 HDAC4P56524 1084 aa27.73■■■□□ 2.03
CCM2-211ENST00000478582 CCINQ13939 588 aa27.73■■■□□ 2.03
CCM2-211ENST00000478582 CDO1Q16878 200 aa27.73■■■□□ 2.03
CCM2-211ENST00000478582 MS4A13Q5J8X5 152 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms