RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.07	□□□□□ -0.64
APTX-222	ENST00000478279		B8ZZF3	427 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	ARHGAP6	O43182	974 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	STX6	O43752	255 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	WNT1	P04628	370 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	GLDC	P23378	1020 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	HOXD9	P28356	352 aa	Predicted RBP	11.07	□□□□□ -0.64
APTX-222	ENST00000478279	CD38	P28907	300 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	EPHA8	P29322	1005 aa	Predicted RBP	11.07	□□□□□ -0.64
APTX-222	ENST00000478279	CLDN10	P78369	228 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	KCNC4	Q03721	635 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	RABEP1	Q15276	862 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	SGSM1	Q2NKQ1	1148 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	PKDCC	Q504Y2	493 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	MPPE1	Q53F39	396 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	FAM26F	Q5R3K3	315 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	ZNF776	Q68DI1	518 aa	Predicted RBP	11.07	□□□□□ -0.64
APTX-222	ENST00000478279	USP30	Q70CQ3	517 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	CHST9	Q7L1S5	443 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	NELFCD	Q8IXH7	590 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	C12orf56	Q8IXR9	622 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	PDILT	Q8N807	584 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	DCBLD1	Q8N8Z6	715 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	ZNF248	Q8NDW4	579 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	PARD3B	Q8TEW8	1205 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	RFFL	Q8WZ73	363 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	EBF2	Q9HAK2	575 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	GDF3	Q9NR23	364 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	MARCH2	Q9P0N8	246 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	SUN2	Q9UH99	717 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	STRIP2	Q9ULQ0	834 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	SCML1	Q9UN30	329 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	CLCA2	Q9UQC9	943 aa		11.07	□□□□□ -0.64
APTX-222	ENST00000478279	BSN	Q9UPA5	3926 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279		A0A1W2PR77	199 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	SLC12A8	A0AV02	714 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	FAM47DP	A6NHR8	397 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	EXOC3	O60645	756 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	RPN1	P04843	607 aa	Known RBP	11.06	□□□□□ -0.64
APTX-222	ENST00000478279	DLD	P09622	509 aa	Known RBP	11.06	□□□□□ -0.64
APTX-222	ENST00000478279	CKMT2	P17540	419 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	RXRG	P48443	463 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	ARRB1	P49407	418 aa	Predicted RBP	11.06	□□□□□ -0.64
APTX-222	ENST00000478279	GALC	P54803	685 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	UCN	P55089	124 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	ASIC1	P78348	528 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	SFSWAP	Q12872	951 aa	Known RBP	11.06	□□□□□ -0.64
APTX-222	ENST00000478279	BNIP3	Q12983	259 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	11.06	□□□□□ -0.64
APTX-222	ENST00000478279	ADIPOR2	Q86V24	386 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	FMNL3	Q8IVF7	1028 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
APTX-222	ENST00000478279	GANC	Q8TET4	914 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	TAF4B	Q92750	862 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	PLD4	Q96BZ4	506 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	TWNK	Q96RR1	684 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	DUSP16	Q9BY84	665 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	SEMA4C	Q9C0C4	833 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	RSPH9	Q9H1X1	276 aa	Predicted RBP	11.06	□□□□□ -0.64
APTX-222	ENST00000478279	PABPC3	Q9H361	631 aa	Known RBP	11.06	□□□□□ -0.64
APTX-222	ENST00000478279	AASDHPPT	Q9NRN7	309 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	KBTBD4	Q9NVX7	518 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	FBXL12	Q9NXK8	326 aa		11.06	□□□□□ -0.64
APTX-222	ENST00000478279	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.06	□□□□□ -0.64
APTX-222	ENST00000478279	LRRC72	A6NJI9	287 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	KIF20A	O95235	890 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	ASS1	P00966	412 aa	Known RBP	11.05	□□□□□ -0.64
APTX-222	ENST00000478279	ATP5B	P06576	529 aa	Known RBP	11.05	□□□□□ -0.64
APTX-222	ENST00000478279	PABPC1	P11940	636 aa	Known RBP	11.05	□□□□□ -0.64
APTX-222	ENST00000478279	C6	P13671	934 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	ASPA	P45381	313 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	PCBP4	P57723	403 aa	Known RBP	11.05	□□□□□ -0.64
APTX-222	ENST00000478279	TMPRSS3	P57727	454 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	ZNF445	P59923	1031 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	INSM1	Q01101	510 aa	Predicted RBP	11.05	□□□□□ -0.64
APTX-222	ENST00000478279	AMPD3	Q01432	767 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	CEBPZ	Q03701	1054 aa	Known RBP	11.05	□□□□□ -0.64
APTX-222	ENST00000478279	INCA1	Q0VD86	236 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	TRIP4	Q15650	581 aa	Predicted RBP	11.05	□□□□□ -0.64
APTX-222	ENST00000478279	ZACN	Q401N2	412 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	SFMBT2	Q5VUG0	894 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	BROX	Q5VW32	411 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	MBLAC2	Q68D91	279 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	CNNM4	Q6P4Q7	775 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	NCEH1	Q6PIU2	408 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	RSRC2	Q7L4I2	434 aa	Known RBP	11.05	□□□□□ -0.64
APTX-222	ENST00000478279	AHI1	Q8N157	1196 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	ARHGAP18	Q8N392	663 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	OXR1	Q8N573	874 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	FAM181A	Q8N9Y4	354 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	OR2T34	Q8NGX1	318 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	ZNF578	Q96N58	590 aa	Predicted RBP	11.05	□□□□□ -0.64
APTX-222	ENST00000478279	ARID3A	Q99856	593 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	NT5C1A	Q9BXI3	368 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	ERVMER34-1	Q9H9K5	563 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	ABCB8	Q9NUT2	735 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	TFIP11	Q9UBB9	837 aa	Known RBP	11.05	□□□□□ -0.64
APTX-222	ENST00000478279	ADAMTS1	Q9UHI8	967 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	GGA2	Q9UJY4	613 aa		11.05	□□□□□ -0.64
APTX-222	ENST00000478279	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.05	□□□□□ -0.64

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