RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 SLC6A3Q01959 620 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 UBXN1Q04323 297 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 NNTQ13423 1086 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 PLK5Q496M5 336 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 HSF5Q4G112 596 aaPredicted RBP12.15□□□□□ -0.46
SKI-202ENST00000478223 MPPE1Q53F39 396 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 DCAF6Q58WW2 860 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 FKBP15Q5T1M5 1219 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 RNF43Q68DV7 783 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 TRNP1Q6NT89 227 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 ANKS1BQ7Z6G8 1248 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 CHPFQ8IZ52 775 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 CFAP52Q8N1V2 620 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 OLIG1Q8TAK6 271 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 GABRG3Q99928 467 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 BPIFA3Q9BQP9 254 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 COX16Q9P0S2 106 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 MBD1Q9UIS9 605 aaPredicted RBP12.15□□□□□ -0.46
SKI-202ENST00000478223 GMEB2Q9UKD1 530 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 RAB23Q9ULC3 237 aa12.15□□□□□ -0.46
SKI-202ENST00000478223 SYCE3A1L190 88 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 LRRC10BA6NIK2 292 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 HSF2BPO75031 334 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 CDK11BP21127 795 aaKnown RBP12.14□□□□□ -0.47
SKI-202ENST00000478223 PRKCHP24723 683 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 SOX5P35711 763 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 GABRB2P47870 512 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 BPIFB4P59827 614 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 IQCB1Q15051 598 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 KLHL40Q2TBA0 621 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 PREPLQ4J6C6 727 aaPredicted RBP12.14□□□□□ -0.47
SKI-202ENST00000478223 MS4A13Q5J8X5 152 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 EFHC1Q5JVL4 640 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 NAA35Q5VZE5 725 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 RAP1GAP2Q684P5 730 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 SMYD5Q6GMV2 418 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 SLC26A9Q7LBE3 791 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 CACNA2D4Q7Z3S7 1137 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 KIAA0907Q7Z7F0 614 aaPredicted RBP12.14□□□□□ -0.47
SKI-202ENST00000478223 XYLT1Q86Y38 959 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 UNC45BQ8IWX7 931 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 TMEM35BQ8NCS4 154 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 KCNV2Q8TDN2 545 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 IPO4Q8TEX9 1081 aaKnown RBP12.14□□□□□ -0.47
SKI-202ENST00000478223 CYB5D2Q8WUJ1 264 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 CPA5Q8WXQ8 436 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 AZIN2Q96A70 460 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 TMA16Q96EY4 203 aaKnown RBP12.14□□□□□ -0.47
SKI-202ENST00000478223 ZC3H10Q96K80 434 aaKnown RBP12.14□□□□□ -0.47
SKI-202ENST00000478223 LMLNQ96KR4 655 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 ERGIC2Q96RQ1 377 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 PCDHB18PQ96TA0 734 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 ARRDC1-AS1Q9H2J1 176 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 SMOC1Q9H4F8 434 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 FAM204AQ9H8W3 233 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 POLMQ9NP87 494 aaPredicted RBP12.14□□□□□ -0.47
SKI-202ENST00000478223 ANLNQ9NQW6 1124 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 ABCB8Q9NUT2 735 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 ASNSD1Q9NWL6 643 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 STIM2Q9P246 746 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 THAP10Q9P2Z0 257 aaPredicted RBP12.14□□□□□ -0.47
SKI-202ENST00000478223 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.14□□□□□ -0.47
SKI-202ENST00000478223 STON1Q9Y6Q2 735 aa12.14□□□□□ -0.47
SKI-202ENST00000478223 KCNU1A8MYU2 1149 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 I6L893 689 aaPredicted RBP12.13□□□□□ -0.47
SKI-202ENST00000478223 EPN2O95208 641 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 RETP07949 1114 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 TPM2P07951 284 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 GLI1P08151 1106 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 NDUFV2P19404 249 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 TACR2P21452 398 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 GGCXP38435 758 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 SLC11A2P49281 568 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 NUMBP49757 651 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 IRAK1P51617 712 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 ATXN1P54253 815 aaKnown RBP12.13□□□□□ -0.47
SKI-202ENST00000478223 RNASE9P60153 205 aaKnown RBP12.13□□□□□ -0.47
SKI-202ENST00000478223 ENPP2Q13822 863 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 ZNF234Q14588 700 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 MAP7D1Q3KQU3 841 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 FSCBQ5H9T9 825 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 MMS22LQ6ZRQ5 1243 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 NUDT18Q6ZVK8 323 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 CHST9Q7L1S5 443 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 TRMT11Q7Z4G4 463 aaKnown RBP12.13□□□□□ -0.47
SKI-202ENST00000478223 PHLDB2Q86SQ0 1253 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 ADIPOR2Q86V24 386 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 CIR1Q86X95 450 aaPredicted RBP12.13□□□□□ -0.47
SKI-202ENST00000478223 ZNF366Q8N895 744 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.13□□□□□ -0.479e-7■■■■□ 22.4
SKI-202ENST00000478223 ZNF397Q8NF99 534 aaPredicted RBP12.13□□□□□ -0.47
SKI-202ENST00000478223 NEK11Q8NG66 645 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 PCMTD1Q96MG8 357 aaPredicted RBP12.13□□□□□ -0.47
SKI-202ENST00000478223 NOX5Q96PH1 765 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 PRMT1Q99873 361 aaKnown RBP12.13□□□□□ -0.47
SKI-202ENST00000478223 SLC2A11Q9BYW1 496 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 CIPCQ9C0C6 399 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 PDCL3Q9H2J4 239 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 SYNCQ9H7C4 482 aa12.13□□□□□ -0.47
SKI-202ENST00000478223 DDIT4Q9NX09 232 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms