RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 IRAK2O43187 625 aa5.61□□□□□ -1.51
PTCD3-211ENST00000476215 COL3A1P02461 1466 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-211ENST00000476215 CHRM5P08912 532 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-211ENST00000476215 CST5P28325 142 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-211ENST00000476215 SLC8A1P32418 973 aa5.61□□□□□ -1.51
PTCD3-211ENST00000476215 AGTR2P50052 363 aa5.61□□□□□ -1.51
PTCD3-211ENST00000476215 PRKAA2P54646 552 aa5.61□□□□□ -1.51
PTCD3-211ENST00000476215 SLC14A1Q13336 389 aa5.61□□□□□ -1.51
PTCD3-211ENST00000476215 SPATA31A1Q5TZJ5 1347 aa5.61□□□□□ -1.51
PTCD3-211ENST00000476215 ZKSCAN2Q63HK3 967 aa5.61□□□□□ -1.51
PTCD3-211ENST00000476215 WDR93Q6P2C0 686 aa5.61□□□□□ -1.51
PTCD3-211ENST00000476215 RANBP10Q6VN20 620 aa5.61□□□□□ -1.51
PTCD3-211ENST00000476215 KYAT3Q6YP21 454 aaKnown RBP5.61□□□□□ -1.51
PTCD3-211ENST00000476215 C16orf71Q8IYS4 520 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-211ENST00000476215 MYRIPQ8NFW9 859 aa5.61□□□□□ -1.51
PTCD3-211ENST00000476215 RNF26Q9BY78 433 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-211ENST00000476215 SEPSECSQ9HD40 501 aaKnown RBP5.61□□□□□ -1.51
PTCD3-211ENST00000476215 ITM2CQ9NQX7 267 aa5.61□□□□□ -1.51
PTCD3-211ENST00000476215 KIF17Q9P2E2 1029 aa5.61□□□□□ -1.51
PTCD3-211ENST00000476215 SLC12A4Q9UP95 1085 aa5.61□□□□□ -1.51
PTCD3-211ENST00000476215 HEMK1Q9Y5R4 338 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-211ENST00000476215 TBC1D3DA0A087WVF3 549 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 TBC1D3IA0A087WXS9 549 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 TBC1D3EA0A087X179 549 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 TBC1D3KA0A087X1G2 549 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 TBC1D3BA6NDS4 549 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 TBC1D3FA6NER0 549 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-211ENST00000476215 MANSC4A6NHS7 340 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-211ENST00000476215 TISP43B9A030 160 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 TBC1D3LB9A6J9 549 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 TMEM232C9JQI7 657 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 H0Y3Z8 333 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 TBC1D3HP0C7X1 549 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 NDUFS1P28331 727 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 SERPINA4P29622 427 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 GRK5P34947 590 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 VPS41P49754 854 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 FAM3BP58499 235 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-211ENST00000476215 RPL15P61313 204 aaKnown RBP5.6□□□□□ -1.51
PTCD3-211ENST00000476215 TUBA4AP68366 448 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 RBM6P78332 1123 aaKnown RBP5.6□□□□□ -1.51
PTCD3-211ENST00000476215 TFF2Q03403 129 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 HNRNPA0Q13151 305 aaKnown RBP5.6□□□□□ -1.51
PTCD3-211ENST00000476215 GAB1Q13480 694 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 GALNTL6Q49A17 601 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 TBC1D3GQ6DHY5 549 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 TBC1D3CQ6IPX1 549 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 SUGP1Q8IWZ8 645 aaKnown RBP5.6□□□□□ -1.51
PTCD3-211ENST00000476215 TBC1D3Q8IZP1 549 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-211ENST00000476215 OR6Y1Q8NGX8 325 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 CSGALNACT1Q8TDX6 532 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 HASPINQ8TF76 798 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 ARL8BQ9NVJ2 186 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 ASNSD1Q9NWL6 643 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 NDUFAF4Q9P032 175 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 LUZP4Q9P127 313 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 SEMA5BQ9P283 1151 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.6□□□□□ -1.51
PTCD3-211ENST00000476215 GPR52Q9Y2T5 361 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 DGKBQ9Y6T7 804 aa5.6□□□□□ -1.51
PTCD3-211ENST00000476215 LINC01548A6NM66 108 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 PRRT4C9JH25 899 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 PRYO14603 147 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 KRT38O76015 456 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 CYP2A6P11509 494 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-211ENST00000476215 ADD2P35612 726 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 ARL4CP56559 192 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 TAS2R50P59544 299 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 BIRC3Q13489 604 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 CUL4BQ13620 913 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 KPNB1Q14974 876 aaKnown RBP5.59□□□□□ -1.51
PTCD3-211ENST00000476215 PFKFB3Q16875 520 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-211ENST00000476215 ADCK5Q3MIX3 580 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 ANKRD45Q5TZF3 282 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 RINLQ6ZS11 566 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 MOGAT3Q86VF5 341 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 ZNF354CQ86Y25 554 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 CPXCR1Q8N123 301 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 SEMA6DQ8NFY4 1073 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 AFG1LQ8WV93 481 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 GOLGA1Q92805 767 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 TRMT61AQ96FX7 289 aaKnown RBP5.59□□□□□ -1.51
PTCD3-211ENST00000476215 NUAK2Q9H093 628 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 KCND3Q9UK17 655 aa5.59□□□□□ -1.51
PTCD3-211ENST00000476215 E7EVH7 732 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 FAM155BO75949 473 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 HOXD12P35452 270 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 STAT6P42226 847 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 AARSP49588 968 aaKnown RBP eCLIP5.58□□□□□ -1.52
PTCD3-211ENST00000476215 CDK7P50613 346 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 TLE3Q04726 772 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 PPFIA1Q13136 1202 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 RAPGEF1Q13905 1077 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 TBRG1Q3YBR2 411 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 ZNF782Q6ZMW2 699 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-211ENST00000476215 FTSJ3Q8IY81 847 aaKnown RBP5.58□□□□□ -1.52
PTCD3-211ENST00000476215 LAS2Q8IYD9 372 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 SRFBP1Q8NEF9 429 aaKnown RBP5.58□□□□□ -1.52
PTCD3-211ENST00000476215 ASB12Q8WXK4 309 aa5.58□□□□□ -1.52
PTCD3-211ENST00000476215 THAP4Q8WY91 577 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms