RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 CPA6Q8N4T0 437 aa22.97■■□□□ 1.27
MCF2L2-209ENST00000475664 HAPLN3Q96S86 360 aa22.97■■□□□ 1.27
MCF2L2-209ENST00000475664 DDX50Q9BQ39 737 aaKnown RBP22.97■■□□□ 1.27
MCF2L2-209ENST00000475664 SPHK2Q9NRA0 654 aa22.97■■□□□ 1.27
MCF2L2-209ENST00000475664 GTSE1Q9NYZ3 720 aa22.97■■□□□ 1.27
MCF2L2-209ENST00000475664 HS3ST4Q9Y661 456 aa22.97■■□□□ 1.27
MCF2L2-209ENST00000475664 TMEM110-MUSTN1A8MSY1 372 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 BUB1O43683 1085 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 BUB1BO60566 1050 aaPredicted RBP22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 TCF4P15884 667 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 AIF1P55008 147 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 PFKPQ01813 784 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 ITPRIPL2Q3MIP1 535 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 LY6G5CQ5SRR4 150 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 RAP1GAP2Q684P5 730 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 ZNF662Q6ZS27 426 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 SLFN11Q7Z7L1 901 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 CHSY1Q86X52 802 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 TMEM25Q86YD3 366 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 UBALD2Q8IYN6 164 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 TPCN2Q8NHX9 752 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 CSGALNACT1Q8TDX6 532 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 P2RY11Q96G91 374 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 CALR3Q96L12 384 aaKnown RBP22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 IRX2Q9BZI1 471 aaPredicted RBP22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 TSGA10Q9BZW7 698 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 MARK1Q9P0L2 795 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 PCSK1NQ9UHG2 260 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 FZD10Q9ULW2 581 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 USP18Q9UMW8 372 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 PPP2R2CQ9Y2T4 447 aa22.96■■□□□ 1.27
MCF2L2-209ENST00000475664 PRPSAP2O60256 369 aa22.95■■□□□ 1.26
MCF2L2-209ENST00000475664 NCOR1O75376 2440 aa22.95■■□□□ 1.26
MCF2L2-209ENST00000475664 ADH1CP00326 375 aa22.95■■□□□ 1.26
MCF2L2-209ENST00000475664 TACR2P21452 398 aa22.95■■□□□ 1.26
MCF2L2-209ENST00000475664 MLLT6P55198 1093 aaPredicted RBP22.95■■□□□ 1.26
MCF2L2-209ENST00000475664 SLC25A11Q02978 314 aaKnown RBP22.95■■□□□ 1.26
MCF2L2-209ENST00000475664 GAB4Q2WGN9 574 aa22.95■■□□□ 1.26
MCF2L2-209ENST00000475664 RFWD3Q6PCD5 774 aa22.95■■□□□ 1.26
MCF2L2-209ENST00000475664 MYEOVQ96EZ4 313 aa22.95■■□□□ 1.26
MCF2L2-209ENST00000475664 C1orf74Q96LT6 269 aa22.95■■□□□ 1.26
MCF2L2-209ENST00000475664 PRICKLE1Q96MT3 831 aaPredicted RBP22.95■■□□□ 1.26
MCF2L2-209ENST00000475664 SNX10Q9Y5X0 201 aa22.95■■□□□ 1.26
MCF2L2-209ENST00000475664 KIAA1549LQ6ZVL6 1849 aa22.94■■□□□ 1.26
MCF2L2-209ENST00000475664 TRDMT1O14717 391 aaKnown RBP22.94■■□□□ 1.26
MCF2L2-209ENST00000475664 HOXC11O43248 304 aaPredicted RBP22.94■■□□□ 1.26
MCF2L2-209ENST00000475664 IL1R2P27930 398 aa22.94■■□□□ 1.26
MCF2L2-209ENST00000475664 GGCXP38435 758 aa22.94■■□□□ 1.26
MCF2L2-209ENST00000475664 AUHQ13825 339 aaKnown RBP22.94■■□□□ 1.26
MCF2L2-209ENST00000475664 ACBD5Q5T8D3 534 aaPredicted RBP22.94■■□□□ 1.26
MCF2L2-209ENST00000475664 C11orf63Q6NUN7 778 aa22.94■■□□□ 1.26
MCF2L2-209ENST00000475664 TPGS1Q6ZTW0 290 aa22.94■■□□□ 1.26
MCF2L2-209ENST00000475664 TTC8Q8TAM2 541 aa22.94■■□□□ 1.26
MCF2L2-209ENST00000475664 SNRNP25Q9BV90 132 aaKnown RBP22.94■■□□□ 1.26
MCF2L2-209ENST00000475664 SIK2Q9H0K1 926 aa22.94■■□□□ 1.26
MCF2L2-209ENST00000475664 OSBPL2Q9H1P3 480 aa22.94■■□□□ 1.26
MCF2L2-209ENST00000475664 DOCK4Q8N1I0 1966 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 MIA3Q5JRA6 1907 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 MACROD2A1Z1Q3 448 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 F5H5T6 163 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 KRT86O43790 486 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 TSPAN3O60637 253 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 PENKP01210 267 aaPredicted RBP22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 ADH5P11766 374 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 SLC1A1P43005 524 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 SGSHP51688 502 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 TAS2R40P59535 323 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 NRG1Q02297 640 aaPredicted RBP22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 GAD2Q05329 585 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 NR1H3Q13133 447 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 MPPE1Q53F39 396 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 EFHC2Q5JST6 749 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 ARTNQ5T4W7 220 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 IER5LQ5T953 404 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 FYB2Q5VWT5 728 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 C14orf80Q86SX3 495 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 ZNF683Q8IZ20 524 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 LGI2Q8N0V4 545 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 CHFRQ96EP1 664 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 MAGEB5Q9BZ81 275 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 GOLPH3Q9H4A6 298 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 AP4E1Q9UPM8 1137 aa22.93■■□□□ 1.26
MCF2L2-209ENST00000475664 GJA4P35212 333 aa22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 NAP1L1P55209 391 aaKnown RBP22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 ANO4Q32M45 955 aa22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 C5orf22Q49AR2 442 aa22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 ERMARDQ5T6L9 678 aa22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 RNF43Q68DV7 783 aa22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 TXNRD3NBQ6F5E7 133 aa22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 FBXL22Q6P050 247 aa22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 PSTKQ8IV42 348 aaKnown RBP22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 RNF10Q8N5U6 811 aaKnown RBP22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 HJURPQ8NCD3 748 aaPredicted RBP22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 BBS2Q9BXC9 721 aa22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 HEBP1Q9NRV9 189 aa22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 GPATCH2LQ9NWQ4 482 aa22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 VANGL2Q9ULK5 521 aa22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 PYCARDQ9ULZ3 195 aa22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 ALG6Q9Y672 507 aa22.92■■□□□ 1.26
MCF2L2-209ENST00000475664 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms