RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 TGM5O43548 720 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 MFSD11O43934 449 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 LPXNO60711 386 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 FAM153BP0C7A2 387 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 ITIH2P19823 946 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 PPP3CCP48454 512 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 VPS41P49754 854 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 KPNA1P52294 538 aaPredicted RBP14.19□□□□□ -0.14
TRAF4-210ENST00000475329 PLTPP55058 493 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 CAV1Q03135 178 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 GBE1Q04446 702 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 CASP8Q14790 479 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 PAFAH1B3Q15102 231 aaKnown RBP14.19□□□□□ -0.14
TRAF4-210ENST00000475329 FAM153CQ494X1 144 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 PLPP4Q5VZY2 271 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 ZDHHC24Q6UX98 284 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 CCDC149Q6ZUS6 474 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 PDZD4Q76G19 769 aaPredicted RBP14.19□□□□□ -0.14
TRAF4-210ENST00000475329 ATP6V0D2Q8N8Y2 350 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 LRRC45Q96CN5 670 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 FMO2Q99518 471 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 C17orf80Q9BSJ5 609 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 CCSER2Q9H7U1 834 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 ALG13Q9NP73 1137 aaKnown RBP14.19□□□□□ -0.14
TRAF4-210ENST00000475329 TLR9Q9NR96 1032 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 ETNK2Q9NVF9 386 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 FAM153AQ9UHL3 310 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 SLC12A6Q9UHW9 1150 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 HBS1LQ9Y450 684 aaKnown RBP14.19□□□□□ -0.14
TRAF4-210ENST00000475329 MFHAS1Q9Y4C4 1052 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 ASB3Q9Y575 518 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 SNX10Q9Y5X0 201 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 NR2E3Q9Y5X4 410 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 IRAK3Q9Y616 596 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 RAD54BQ9Y620 910 aa14.19□□□□□ -0.14
TRAF4-210ENST00000475329 SLC12A8A0AV02 714 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 BCLAF3A2AJT9 711 aaKnown RBP14.18□□□□□ -0.14
TRAF4-210ENST00000475329 ZNF840PA6NDX5 716 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 HACD1B0YJ81 288 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 ZNF189O75820 626 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-210ENST00000475329 LRIG2O94898 1065 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 MOCS2O96007 188 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-210ENST00000475329 IFNB1P01574 187 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 IGLV3-27P01718 113 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 RB1P06400 928 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 ERCC2P18074 760 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 IVDP26440 423 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 STIP1P31948 543 aaKnown RBP14.18□□□□□ -0.14
TRAF4-210ENST00000475329 MAGEA10P43363 369 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-210ENST00000475329 TUBP50607 506 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 ERVFC1P60507 584 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 NRG1Q02297 640 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-210ENST00000475329 RING1Q06587 406 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 GPS1Q13098 491 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 MTA1Q13330 715 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 P3H1Q32P28 736 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 SLC45A4Q5BKX6 768 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 C9orf50Q5SZB4 431 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 HECTD3Q5T447 861 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 IZUMO3Q5VZ72 239 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 MIB1Q86YT6 1006 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 UNC45BQ8IWX7 931 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 MREGQ8N565 214 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 SPPL3Q8TCT6 385 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 POF1BQ8WVV4 589 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 ART4Q93070 314 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 PSMG2Q969U7 264 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 TBC1D31Q96DN5 1066 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 GDAP1L1Q96MZ0 367 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 SAMD11Q96NU1 681 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 OLFM3Q96PB7 478 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 QKIQ96PU8 341 aaKnown RBP eCLIP14.18□□□□□ -0.14
TRAF4-210ENST00000475329 NACA2Q9H009 215 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 SIK2Q9H0K1 926 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 ACBD3Q9H3P7 528 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 DTLQ9NZJ0 730 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 DNMT3LQ9UJW3 386 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 NUP205Q92621 2012 aa14.18□□□□□ -0.14
TRAF4-210ENST00000475329 NYNRINQ9P2P1 1898 aaKnown RBP14.18□□□□□ -0.14
TRAF4-210ENST00000475329 C2orf71A6NGG8 1288 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 DNALI1O14645 258 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-210ENST00000475329 MAP2K7O14733 419 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 PPP1R12AO14974 1030 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-210ENST00000475329 FGF10O15520 208 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-210ENST00000475329 KCNN4O15554 427 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 TBX18O95935 607 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 GLUD1P00367 558 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 LRG1P02750 347 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 SPATA31D3P0C874 917 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 ZSCAN5DPP0CG00 497 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 ETS1P14921 441 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 EPHB2P29323 1055 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 HOXC13P31276 330 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 SERPINB6P35237 376 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 ATP5C1P36542 298 aaKnown RBP14.17□□□□□ -0.14
TRAF4-210ENST00000475329 GGCXP38435 758 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 ITGA8P53708 1063 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 GDF10P55107 478 aa14.17□□□□□ -0.14
TRAF4-210ENST00000475329 SLC10A2Q12908 348 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-210ENST00000475329 PDK1Q15118 436 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms