RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 NHLH1Q02575 133 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 PPP2R5DQ14738 602 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 ZNF528Q3MIS6 628 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 C2orf27AQ580R0 203 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 EMC10Q5UCC4 262 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 SPECC1LQ69YQ0 1117 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 TSSK4Q6SA08 328 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 VSTM4Q8IW00 320 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 MCOLN2Q8IZK6 566 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 EMC1Q8N766 993 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 CCDC26Q8TAB7 109 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 JOSD2Q8TAC2 188 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 ATOH1Q92858 354 aaPredicted RBP16.83■□□□□ 0.28
SRM-204ENST00000475189 RNF34Q969K3 372 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 MYEOVQ96EZ4 313 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 CFAP57Q96MR6 1250 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 DDX50Q9BQ39 737 aaKnown RBP16.83■□□□□ 0.28
SRM-204ENST00000475189 RBSNQ9H1K0 784 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 POLR3BQ9NW08 1133 aaPredicted RBP16.83■□□□□ 0.28
SRM-204ENST00000475189 SLC12A6Q9UHW9 1150 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 SLC27A6Q9Y2P4 619 aa16.83■□□□□ 0.28
SRM-204ENST00000475189 TCRBV5S1A1TA0A578 114 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 TMCO5BA8MYB1 307 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 K7ESF4 209 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 F9P00740 461 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 GZMAP12544 262 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 ABCB4P21439 1286 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 TACR2P21452 398 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 HOXC13P31276 330 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 TIE1P35590 1138 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 CXCR3P49682 368 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 MRPS21P82921 87 aaKnown RBP16.82■□□□□ 0.28
SRM-204ENST00000475189 DEUP1Q05D60 604 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 MS4A13Q5J8X5 152 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 C10orf76Q5T2E6 689 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 RNF43Q68DV7 783 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 PPP1R2P3Q6NXS1 205 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 SARM1Q6SZW1 724 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 NUDT18Q6ZVK8 323 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 BNIPLQ7Z465 357 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 GAS2L3Q86XJ1 694 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 C3orf20Q8ND61 904 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 RXFP2Q8WXD0 754 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 PRICKLE1Q96MT3 831 aaPredicted RBP16.82■□□□□ 0.28
SRM-204ENST00000475189 SLC2A11Q9BYW1 496 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 FAM86C1Q9NVL1 165 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 HCN2Q9UL51 889 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 STARD13Q9Y3M8 1113 aa16.82■□□□□ 0.28
SRM-204ENST00000475189 BZW2Q9Y6E2 419 aaKnown RBP16.82■□□□□ 0.28
SRM-204ENST00000475189 C2CD4BA6NLJ0 364 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 SIGLEC16A6NMB1 481 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 PRRT4C9JH25 899 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 TBL1XO60907 577 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 ENDOD1O94919 500 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 SERPING1P05155 500 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 KRT3P12035 628 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 PDGFRAP16234 1089 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 ATXN1P54253 815 aaKnown RBP16.81■□□□□ 0.28
SRM-204ENST00000475189 TDRD12Q587J7 1177 aaKnown RBP16.81■□□□□ 0.28
SRM-204ENST00000475189 MPP7Q5T2T1 576 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 RAP1GAP2Q684P5 730 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 DNAAF5Q86Y56 855 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 IL17RCQ8NAC3 791 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 NELL1Q92832 810 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 ACDQ96AP0 544 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 VCPIP1Q96JH7 1222 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 PRMT1Q99873 361 aaKnown RBP16.81■□□□□ 0.28
SRM-204ENST00000475189 SELENOOQ9BVL4 669 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 ARHGEF38Q9NXL2 777 aa16.81■□□□□ 0.28
SRM-204ENST00000475189 RTN2O75298 545 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 ADCY5O95622 1261 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 PLEKP08567 350 aaPredicted RBP16.8■□□□□ 0.28
SRM-204ENST00000475189 RRM1P23921 792 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 HNRNPH3P31942 346 aaKnown RBP16.8■□□□□ 0.28
SRM-204ENST00000475189 RFC1P35251 1148 aaPredicted RBP16.8■□□□□ 0.28
SRM-204ENST00000475189 RPS24P62847 133 aaKnown RBP16.8■□□□□ 0.28
SRM-204ENST00000475189 TRIM14Q14142 442 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 GEN1Q17RS7 908 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 C15orf59Q2T9L4 293 aaPredicted RBP16.8■□□□□ 0.28
SRM-204ENST00000475189 CCDC14Q49A88 953 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 BRMS1LQ5PSV4 323 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 PPP1R15BQ5SWA1 713 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 WDR59Q6PJI9 974 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 SND1Q7KZF4 910 aaKnown RBP eCLIP16.8■□□□□ 0.28
SRM-204ENST00000475189 SYT13Q7L8C5 426 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 CHSY1Q86X52 802 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 LGI2Q8N0V4 545 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 CCDC33Q8N5R6 958 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 ALLCQ8N6M5 410 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 HJURPQ8NCD3 748 aaPredicted RBP16.8■□□□□ 0.28
SRM-204ENST00000475189 WDCPQ9H6R7 721 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 ZDHHC4Q9NPG8 344 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 ANLNQ9NQW6 1124 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 TMEM51Q9NW97 253 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 STIM2Q9P246 746 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 MMP17Q9ULZ9 603 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 SLC8A2Q9UPR5 921 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 EML5Q05BV3 1969 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 DOCK4Q8N1I0 1966 aa16.8■□□□□ 0.28
SRM-204ENST00000475189 I6L893 689 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms