RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 HAPLN3Q96S86 360 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 PRMT1Q99873 361 aaKnown RBP10.38□□□□□ -0.75
COL8A1-206ENST00000474648 SNRNP25Q9BV90 132 aaKnown RBP10.38□□□□□ -0.75
COL8A1-206ENST00000474648 PLA2G2FQ9BZM2 168 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 OSBPL2Q9H1P3 480 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 ZWILCHQ9H900 591 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 GPATCH2LQ9NWQ4 482 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 EPS15L1Q9UBC2 864 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 STOML2Q9UJZ1 356 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 SNX10Q9Y5X0 201 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 HS3ST4Q9Y661 456 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 ZFP37Q9Y6Q3 630 aaPredicted RBP10.38□□□□□ -0.75
COL8A1-206ENST00000474648 E2F8A0AVK6 867 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 C3orf70A6NLC5 250 aaPredicted RBP10.37□□□□□ -0.75
COL8A1-206ENST00000474648 FAM72CH0Y354 149 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 GFRA2O00451 464 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 ENC1O14682 589 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 PSTPIP1O43586 416 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 ACSL4O60488 711 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 MOCS2O96007 188 aaPredicted RBP10.37□□□□□ -0.75
COL8A1-206ENST00000474648 APOEP02649 317 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 KRT7P08729 469 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 IL4RP24394 825 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 CORO1AP31146 461 aaKnown RBP10.37□□□□□ -0.75
COL8A1-206ENST00000474648 L1CAMP32004 1257 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 GBP2P32456 591 aaPredicted RBP10.37□□□□□ -0.75
COL8A1-206ENST00000474648 AIF1P55008 147 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 TFF2Q03403 129 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 USP4Q13107 963 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 SEMA3BQ13214 749 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 RPS6KA1Q15418 735 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 SMAD2Q15796 467 aaKnown RBP10.37□□□□□ -0.75
COL8A1-206ENST00000474648 SMTNL2Q2TAL5 461 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 ARL13BQ3SXY8 428 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 FAM133BQ5BKY9 247 aaKnown RBP10.37□□□□□ -0.75
COL8A1-206ENST00000474648 FAM72AQ5TYM5 149 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 PIK3R6Q5UE93 754 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 NUGGCQ68CJ6 796 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 FAM72DQ6L9T8 149 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 PARM1Q6UWI2 310 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 OTOP3Q7RTS5 596 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 ANKS1BQ7Z6G8 1248 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 C14orf80Q86SX3 495 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 FAM72BQ86X60 149 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 DENND1CQ8IV53 801 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 KATNAL2Q8IYT4 538 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 ZNF683Q8IZ20 524 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 PYROXD2Q8N2H3 581 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 KIAA1958Q8N8K9 716 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 ATP6V0D2Q8N8Y2 350 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 ACSF2Q96CM8 615 aaPredicted RBP10.37□□□□□ -0.75
COL8A1-206ENST00000474648 MYEOVQ96EZ4 313 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 P2RY11Q96G91 374 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 BTN2A3PQ96KV6 586 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 C1orf74Q96LT6 269 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 KCTD15Q96SI1 283 aaPredicted RBP10.37□□□□□ -0.75
COL8A1-206ENST00000474648 DCLK3Q9C098 648 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 LINC00597Q9H2U6 94 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 OBP2AQ9NY56 170 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 SLC12A6Q9UHW9 1150 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 JRKLQ9Y4A0 524 aa10.37□□□□□ -0.75
COL8A1-206ENST00000474648 CCDC66A2RUB6 948 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 DRGXA6NNA5 263 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 HEPACAM2A8MVW5 462 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 MIF4GDA9UHW6 222 aaKnown RBP10.36□□□□□ -0.75
COL8A1-206ENST00000474648 ESPNB1AK53 854 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 C2CD4DB7Z1M9 353 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 ANHXE9PGG2 379 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 SCAMP3O14828 347 aaKnown RBP10.36□□□□□ -0.75
COL8A1-206ENST00000474648 ZNF500O60304 480 aaPredicted RBP10.36□□□□□ -0.75
COL8A1-206ENST00000474648 LATS1O95835 1130 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 ATP1A1P05023 1023 aaKnown RBP10.36□□□□□ -0.75
COL8A1-206ENST00000474648 CD48P09326 243 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 PYGMP11217 842 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 KDELR1P24390 212 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 SLC6A4P31645 630 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 GGCXP38435 758 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 HARS2P49590 506 aaKnown RBP10.36□□□□□ -0.75
COL8A1-206ENST00000474648 NRG1Q02297 640 aaPredicted RBP10.36□□□□□ -0.75
COL8A1-206ENST00000474648 DPYSL2Q16555 572 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 TAZQ16635 292 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 PUS10Q3MIT2 529 aaKnown RBP10.36□□□□□ -0.75
COL8A1-206ENST00000474648 C5orf22Q49AR2 442 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 MS4A13Q5J8X5 152 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 DCAF12L1Q5VU92 463 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 PTCRAQ6ISU1 281 aaPredicted RBP10.36□□□□□ -0.75
COL8A1-206ENST00000474648 DDX42Q86XP3 938 aaKnown RBP eCLIP10.36□□□□□ -0.75
COL8A1-206ENST00000474648 BBS7Q8IWZ6 715 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 FAM217AQ8IXS0 508 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 TSC1Q92574 1164 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 HSPH1Q92598 858 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 FGF14Q92915 247 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 RPP25Q9BUL9 199 aaKnown RBP10.36□□□□□ -0.75
COL8A1-206ENST00000474648 PHF7Q9BWX1 381 aaPredicted RBP10.36□□□□□ -0.75
COL8A1-206ENST00000474648 SIK2Q9H0K1 926 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 DHX35Q9H5Z1 703 aaKnown RBP10.36□□□□□ -0.75
COL8A1-206ENST00000474648 KIF9Q9HAQ2 790 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 PCDH18Q9HCL0 1135 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 OR12D3Q9UGF7 316 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 AP4E1Q9UPM8 1137 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms