RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 UNC93B1Q9H1C4 597 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 MAGEH1Q9H213 219 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 EVA1AQ9H8M9 152 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 TMEM39AQ9NV64 488 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 HPSEQ9Y251 543 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 LRCH1Q9Y2L9 728 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 SNX14Q9Y5W7 946 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 SLC12A7Q9Y666 1083 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PMF1-BGLAPU3KQ54 211 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 SYCE1LA8MT33 242 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 AGAP14A8MT82 685 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PRSS44E7EML9 344 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 ATP6V1G2-DDX39BF2Z307 99 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 WNT7AO00755 349 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 CASC3O15234 703 aaKnown RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 PQBP1O60828 265 aaKnown RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 MYO1DO94832 1006 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 RALAP11233 206 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 CPA3P15088 417 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 GTF2H1P32780 548 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 CDH5P33151 784 aaPredicted RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 CCNFP41002 786 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 TMED10P49755 219 aaKnown RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 CLK3P49761 638 aaKnown RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 RGS7P49802 495 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 GNG10P50151 68 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 DNM2P50570 870 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 POLE2P56282 527 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PCGF3Q3KNV8 242 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 NBPF12Q5TAG4 269 aaPredicted RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 CAVIN1Q6NZI2 390 aaKnown RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 GGT6Q6P531 493 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PAOXQ6QHF9 649 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 C6orf15Q6UXA7 325 aaPredicted RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 OVCH2Q7RTZ1 564 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PTRH1Q86Y79 214 aaKnown RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 RIOX2Q8IUF8 465 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 CYP4X1Q8N118 509 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 ELMOD1Q8N336 334 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 LIX1Q8N485 282 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PLD5Q8N7P1 536 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 C11orf65Q8NCR3 313 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 SRFBP1Q8NEF9 429 aaKnown RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 TRPV1Q8NER1 839 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 CMASQ8NFW8 434 aaPredicted RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 OR8J2Q8NGG1 315 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 CHTF18Q8WVB6 975 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 ATP2A3Q93084 1043 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 MARC2Q969Z3 335 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 CHMP6Q96FZ7 201 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 DMRTB1Q96MA1 342 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 QRFPRQ96P65 431 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 FAM111AQ96PZ2 611 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 USP28Q96RU2 1077 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PSD2Q9BQI7 771 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 SEC22CQ9BRL7 303 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 TRIM45Q9H8W5 580 aaPredicted RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 SUGCTQ9HAC7 445 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PKD2L2Q9NZM6 624 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 ERVK-11Q9UQG0 969 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PCDHGA10Q9Y5H3 936 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 GMPPBQ9Y5P6 360 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 ELP1O95163 1332 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 IQCF5A8MTL0 148 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 ATP5J2-PTCD1G3V325 749 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 MATN2O00339 956 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 ZBTB7BO15156 539 aaPredicted RBP3.59□□□□□ -1.83
UBR3-208ENST00000474426 PCDHGA12O60330 932 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 EXOC3O60645 756 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 APBA3O96018 575 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 IL1AP01583 271 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 FHP07954 510 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 STAG3L3P0CL85 134 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 PDCP20941 246 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 CDC25AP30304 524 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 GABRB2P47870 512 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 RELAQ04206 551 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 TRA2AQ13595 282 aaKnown RBP eCLIP3.59□□□□□ -1.83
UBR3-208ENST00000474426 TMEM266Q2M3C6 531 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 KLHL40Q2TBA0 621 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 CTXN3Q4LDR2 81 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 TTI2Q6NXR4 508 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 INTS5Q6P9B9 1019 aaKnown RBP3.59□□□□□ -1.83
UBR3-208ENST00000474426 KCNT2Q6UVM3 1135 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 NEK8Q86SG6 692 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 ADGRA1Q86SQ6 560 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 CDKL3Q8IVW4 592 aaPredicted RBP3.59□□□□□ -1.83
UBR3-208ENST00000474426 MAPKAPK5Q8IW41 473 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 NELFCDQ8IXH7 590 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 ADGRG5Q8IZF4 528 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 ZGPATQ8N5A5 531 aaKnown RBP3.59□□□□□ -1.83
UBR3-208ENST00000474426 CNNM3Q8NE01 707 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 BBS10Q8TAM1 723 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 SPATA20Q8TB22 786 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 CIDECQ96AQ7 238 aaPredicted RBP3.59□□□□□ -1.83
UBR3-208ENST00000474426 ZNF668Q96K58 619 aaPredicted RBP3.59□□□□□ -1.83
UBR3-208ENST00000474426 GBP5Q96PP8 586 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 TINAGL1Q9GZM7 467 aaPredicted RBP3.59□□□□□ -1.83
UBR3-208ENST00000474426 MTFR1LQ9H019 292 aa3.59□□□□□ -1.83
UBR3-208ENST00000474426 PCED1AQ9H1Q7 454 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms